<pre style='margin:0'>
Marcus Calhoun-Lopez (MarcusCalhoun-Lopez) pushed a commit to branch master
in repository macports-ports.
</pre>
<p><a href="https://github.com/macports/macports-ports/commit/52a618675dfae7969cd0ad33f613e98573701f2d">https://github.com/macports/macports-ports/commit/52a618675dfae7969cd0ad33f613e98573701f2d</a></p>
<pre style="white-space: pre; background: #F8F8F8"><span style='display:block; white-space:pre;color:#808000;'>commit 52a618675dfae7969cd0ad33f613e98573701f2d
</span>Author: Marcus Calhoun-Lopez <mcalhoun@macports.org>
AuthorDate: Sun Jan 27 19:11:26 2019 -0700
<span style='display:block; white-space:pre;color:#404040;'> bowtie: ensure that MacPorts Python is used
</span>---
science/bowtie/Portfile | 12 +++++++++++-
1 file changed, 11 insertions(+), 1 deletion(-)
<span style='display:block; white-space:pre;color:#808080;'>diff --git a/science/bowtie/Portfile b/science/bowtie/Portfile
</span><span style='display:block; white-space:pre;color:#808080;'>index 09918f7..0a1050d 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/science/bowtie/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/science/bowtie/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -5,7 +5,7 @@ PortGroup github 1.0
</span>
name bowtie
github.setup BenLangmead bowtie 1.2.2_p1 v
<span style='display:block; white-space:pre;background:#ffe0e0;'>-revision 1
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision 2
</span> categories science biology
platforms darwin
maintainers {mcalhoun @MarcusCalhoun-Lopez} openmaintainer
<span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -29,6 +29,14 @@ checksums rmd160 9f818e1e85abaf09ddc58cbe96f9cf735f0ca918 \
</span> patchfiles-append patch-Makefile.diff \
patch-seqan.diff
<span style='display:block; white-space:pre;background:#e0ffe0;'>+post-patch {
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ reinplace -W ${worksrcpath} \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ "s|^#!/usr/bin/env python|#!${prefix}/bin/python2.7|" \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ bowtie \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ bowtie-build \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ bowtie-inspect
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+}
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span> supported_archs x86_64 ppc64
installs_libs no
<span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -37,6 +45,8 @@ depends_build-append port:seqan-1
</span> depends_lib-append port:zlib \
port:tbb
<span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_run-append port:python27
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span> # replicate values from Makefile prior to patching
configure.optflags -O3
configure.cppflags-prepend -I${prefix}/include/seqan-1
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