<pre style='margin:0'>
Ryan Schmidt (ryandesign) pushed a commit to branch master
in repository macports-ports.
</pre>
<p><a href="https://github.com/macports/macports-ports/commit/d724b0edb00f99eb2b13e489e3432bb16a7795c9">https://github.com/macports/macports-ports/commit/d724b0edb00f99eb2b13e489e3432bb16a7795c9</a></p>
<pre style="white-space: pre; background: #F8F8F8">The following commit(s) were added to refs/heads/master by this push:
<span style='display:block; white-space:pre;color:#404040;'> new d724b0edb00 bcftools: Update to 1.11
</span>d724b0edb00 is described below
<span style='display:block; white-space:pre;color:#808000;'>commit d724b0edb00f99eb2b13e489e3432bb16a7795c9
</span>Author: Ryan Schmidt <ryandesign@macports.org>
AuthorDate: Sun Sep 27 06:37:02 2020 -0500
<span style='display:block; white-space:pre;color:#404040;'> bcftools: Update to 1.11
</span>---
science/bcftools/Portfile | 22 +++++++---------------
1 file changed, 7 insertions(+), 15 deletions(-)
<span style='display:block; white-space:pre;color:#808080;'>diff --git a/science/bcftools/Portfile b/science/bcftools/Portfile
</span><span style='display:block; white-space:pre;color:#808080;'>index e21c997b693..60173ce41a2 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/science/bcftools/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/science/bcftools/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -3,11 +3,11 @@
</span> PortSystem 1.0
PortGroup github 1.0
<span style='display:block; white-space:pre;background:#ffe0e0;'>-github.setup samtools bcftools 1.10.2
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+github.setup samtools bcftools 1.11
</span> revision 0
<span style='display:block; white-space:pre;background:#ffe0e0;'>-checksums rmd160 e1fceeef5ffd339b6cb214065ae130ad2bd0fe30 \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- sha256 f57301869d0055ce3b8e26d8ad880c0c1989bf25eaec8ea5db99b60e31354e2c \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- size 3702679
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums rmd160 562903d7e637ea92ff61527c42d41e05e2e23e57 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ sha256 3ceee47456ec481f34fa6c34beb6fe892b5b365933191132721fdf126e45a064 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ size 3827193
</span>
categories science
platforms darwin
<span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -22,22 +22,14 @@ long_description BCFtools implements utilities for variant calling (in \
</span> BCF files. The program is intended to replace the \
Perl-based tools from vcftools.
<span style='display:block; white-space:pre;background:#ffe0e0;'>-homepage http://www.htslib.org/
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+homepage https://www.htslib.org
</span> github.tarball_from releases
use_bzip2 yes
<span style='display:block; white-space:pre;background:#ffe0e0;'>-depends_lib port:bzip2 \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- port:curl \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- port:xz \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_lib port:htslib \
</span> port:zlib
<span style='display:block; white-space:pre;background:#ffe0e0;'>-use_configure no
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-variant universal {}
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-build.args CC="${configure.cc} [get_canonical_archflags cc]"
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-destroot.args-append prefix=${prefix}
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+configure.args --with-htslib=system
</span>
post-destroot {
xinstall -d ${destroot}${prefix}/share/doc/${name}
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