<pre style='margin:0'>
Renee Otten (reneeotten) pushed a commit to branch master
in repository macports-ports.
</pre>
<p><a href="https://github.com/macports/macports-ports/commit/ef8d820a991c0e9e505263ec6165908caab1a7ce">https://github.com/macports/macports-ports/commit/ef8d820a991c0e9e505263ec6165908caab1a7ce</a></p>
<pre style="white-space: pre; background: #F8F8F8">The following commit(s) were added to refs/heads/master by this push:
<span style='display:block; white-space:pre;color:#404040;'> new ef8d820a991 hmmer: update to 3.3.2, enable tests
</span>ef8d820a991 is described below
<span style='display:block; white-space:pre;color:#808000;'>commit ef8d820a991c0e9e505263ec6165908caab1a7ce
</span>Author: Renee Otten <reneeotten@macports.org>
AuthorDate: Fri Nov 12 11:28:56 2021 -0500
<span style='display:block; white-space:pre;color:#404040;'> hmmer: update to 3.3.2, enable tests
</span><span style='display:block; white-space:pre;color:#404040;'>
</span><span style='display:block; white-space:pre;color:#404040;'> - add/conform to modeline
</span><span style='display:block; white-space:pre;color:#404040;'> - assume maintainership
</span>---
science/hmmer/Portfile | 37 ++++++++++++++++++++-----------------
1 file changed, 20 insertions(+), 17 deletions(-)
<span style='display:block; white-space:pre;color:#808080;'>diff --git a/science/hmmer/Portfile b/science/hmmer/Portfile
</span><span style='display:block; white-space:pre;color:#808080;'>index 715d92735b5..360aff097f6 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/science/hmmer/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/science/hmmer/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -1,26 +1,29 @@
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-PortSystem 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem 1.0
</span>
name hmmer
<span style='display:block; white-space:pre;background:#ffe0e0;'>-version 3.3
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-epoch 0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+version 3.3.2
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision 0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span> categories science
<span style='display:block; white-space:pre;background:#ffe0e0;'>-maintainers nomaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers {reneeotten @reneeotten} openmaintainer
</span> license BSD
<span style='display:block; white-space:pre;background:#ffe0e0;'>-description HMMER searches biological sequence databases for \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- homologous sequences.
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-long_description HMMER searches biological sequence databases for \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- homologous sequences, using either single sequences or multiple \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- sequence alignments as queries. HMMER implements a technology \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- called "profile hidden Markov models" (profile HMMs). HMMER is \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- the software engine underlying many protein family domain \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- databases and large-scale annotation pipelines, including the \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- Pfam and SMART databases.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description HMMER is used for searching sequence databases for sequence \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ homologs, and for making sequence alignments
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description ${description}. It implements methods using probabilistic \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ models called profile hidden Markov models (profile HMMs).
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span> homepage http://hmmer.org/
<span style='display:block; white-space:pre;background:#ffe0e0;'>-platforms darwin
</span> master_sites http://eddylab.org/software/hmmer/
<span style='display:block; white-space:pre;background:#ffe0e0;'>-checksums rmd160 aa4c7fa8d727cc65fdcb39420818202755e9c2ad \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- sha256 0186bf40af67032666014971ed8ddc3cf2834bebc2be5b3bc0304a93e763736c \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- size 18614771
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums rmd160 7c707804e2c51f410ec0187235a48f3a4cac76fc \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ sha256 92fee9b5efe37a5276352d3502775e7c46e9f7a0ee45a331eacb2a0cac713c69 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ size 18213049
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run yes
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.target check
</span>
livecheck.type regex
livecheck.url ${homepage}/download.html
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