<pre style='margin:0'>
Herby Gillot (herbygillot) pushed a commit to branch master
in repository macports-ports.

</pre>
<p><a href="https://github.com/macports/macports-ports/commit/18d9fe3744439652a32c3bdc32fd9c270ac2727d">https://github.com/macports/macports-ports/commit/18d9fe3744439652a32c3bdc32fd9c270ac2727d</a></p>
<pre style="white-space: pre; background: #F8F8F8"><span style='display:block; white-space:pre;color:#808000;'>commit 18d9fe3744439652a32c3bdc32fd9c270ac2727d
</span>Author: barracuda156 <vital.had@gmail.com>
AuthorDate: Thu Aug 10 02:26:49 2023 +0800

<span style='display:block; white-space:pre;color:#404040;'>    R-Bioc*: update outdated Bioconductor packages
</span>---
 R/R-BiocCheck/Portfile     | 12 +++++++-----
 R/R-BiocFileCache/Portfile | 10 +++++-----
 R/R-BiocParallel/Portfile  | 11 ++++++-----
 R/R-BiocSingular/Portfile  | 11 ++++++-----
 R/R-BiocStyle/Portfile     | 10 ++++++----
 R/R-biocViews/Portfile     |  8 ++++----
 6 files changed, 34 insertions(+), 28 deletions(-)

<span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-BiocCheck/Portfile b/R/R-BiocCheck/Portfile
</span><span style='display:block; white-space:pre;color:#808080;'>index 840bda37bb4..41ca3b4c4c2 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/R/R-BiocCheck/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-BiocCheck/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -3,15 +3,17 @@
</span> PortSystem          1.0
 PortGroup           R 1.0
 
<span style='display:block; white-space:pre;background:#ffe0e0;'>-R.setup             bioconductor Bioconductor BiocCheck 1.36.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup             github Bioconductor BiocCheck 5cb00219f96c15fd0c91383e4aec226d6ed5c64f
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+version             1.37.7
</span> revision            0
 maintainers         nomaintainer
 license             Artistic-2
 description         Bioconductor-specific package checks
 long_description    {*}${description}
<span style='display:block; white-space:pre;background:#ffe0e0;'>-checksums           rmd160  287deab60f4bfda9d366b21d260a2881a98221de \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-                    sha256  c949052b2d4ed39d945f79f33dbbd2572c6a076c43f8daa65226c2994997c495 \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-                    size    4373008
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+homepage            https://bioconductor.org/packages/release/bioc/html/BiocCheck.html
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums           rmd160  54abe6646baddf2e3f1da026e1e375c439e8c948 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    sha256  7b214ef2de20690492f9a16dc8cba95d5074a29f2ef4719051845fe5eb0f06df \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    size    4135218
</span> supported_archs     noarch
 
 depends_lib-append  port:R-BiocFileCache \
<span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -26,8 +28,8 @@ depends_test-append port:R-Biobase \
</span>                     port:R-BiocGenerics \
                     port:R-BiocStyle \
                     port:R-callr \
<span style='display:block; white-space:pre;background:#ffe0e0;'>-                    port:R-downloader \
</span>                     port:R-devtools \
<span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-downloader \
</span>                     port:R-jsonlite \
                     port:R-rmarkdown \
                     port:R-RUnit \
<span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-BiocFileCache/Portfile b/R/R-BiocFileCache/Portfile
</span><span style='display:block; white-space:pre;color:#808080;'>index 960eb1d4753..17b384a7897 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/R/R-BiocFileCache/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-BiocFileCache/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -3,17 +3,17 @@
</span> PortSystem          1.0
 PortGroup           R 1.0
 
<span style='display:block; white-space:pre;background:#ffe0e0;'>-R.setup             github Bioconductor BiocFileCache 4ce3669915f9f74cea1d9784d2400e84efb13498
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-version             2.9.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup             github Bioconductor BiocFileCache 21fc57aa136604e341b5108712e1c2dba446f649
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+version             2.9.1
</span> revision            0
 maintainers         nomaintainer
 license             Artistic-2
 description         Manage files across sessions
 long_description    {*}${description}
 homepage            https://bioconductor.org/packages/release/bioc/html/BiocFileCache.html
<span style='display:block; white-space:pre;background:#ffe0e0;'>-checksums           rmd160  a4d66a2b6df80eb43c7b618434334e7f85082939 \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-                    sha256  df1b5574dd9715fa48de8ec298ddc7dcf07a86f31db46e945dd4d97cae8ff69e \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-                    size    52247
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums           rmd160  f54e715606ed504c0bb4ccf5da9fbea45f5b414b \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    sha256  1df7037da1a929483f6150011c79ce6609d6fce1d2750fa0ab67206b8b34b566 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    size    52424
</span> supported_archs     noarch
 
 depends_lib-append  port:R-curl \
<span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-BiocParallel/Portfile b/R/R-BiocParallel/Portfile
</span><span style='display:block; white-space:pre;color:#808080;'>index 1b4e8a00a2f..0d1323c9298 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/R/R-BiocParallel/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-BiocParallel/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -3,17 +3,18 @@
</span> PortSystem          1.0
 PortGroup           R 1.0
 
<span style='display:block; white-space:pre;background:#ffe0e0;'>-R.setup             github Bioconductor BiocParallel df2768378a8222900f99102ec12a479d8bf533fa
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-version             1.35.2
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup             github Bioconductor BiocParallel ce0be51cf06c501e203f6ed743aa04821a7beded
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+version             1.35.3
</span> revision            0
 categories-append   parallel
 maintainers         {@barracuda156 gmail.com:vital.had} openmaintainer
 license             {GPL-2 GPL-3}
 description         Bioconductor facilities for parallel evaluation
 long_description    {*}${description}
<span style='display:block; white-space:pre;background:#ffe0e0;'>-checksums           rmd160  234f3acac16d6c60cdab2adc9fee1e5a5d092210 \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-                    sha256  fa6bf7e3c1d8410b9212c290b620f9ff249eb2511b11bbb37528690557f4aa4e \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-                    size    147105
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+homepage            https://bioconductor.org/packages/release/bioc/html/BiocParallel.html
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums           rmd160  b567c283bdafd66c2cd801240234d405654b18dd \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    sha256  3fa494a423560c0ef38617cd9b4fa07f278fe313ee0c07fe83df9a897be8d689 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    size    147106
</span> 
 depends_lib-append  port:R-BH \
                     port:R-cpp11 \
<span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-BiocSingular/Portfile b/R/R-BiocSingular/Portfile
</span><span style='display:block; white-space:pre;color:#808080;'>index b284680196b..b0f800a79e9 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/R/R-BiocSingular/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-BiocSingular/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -3,16 +3,17 @@
</span> PortSystem          1.0
 PortGroup           R 1.0
 
<span style='display:block; white-space:pre;background:#ffe0e0;'>-R.setup             bioconductor LTLA BiocSingular 1.16.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup             github LTLA BiocSingular 90e33acdae02ffff05a9c20724cfc3a61be7843c
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+version             1.17.1
</span> revision            0
 maintainers         {@barracuda156 gmail.com:vital.had} openmaintainer
 license             GPL-3
 description         Singular value decomposition for Bioconductor packages
 long_description    {*}${description}
<span style='display:block; white-space:pre;background:#ffe0e0;'>-homepage            https://github.com/LTLA/BiocSingular
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-checksums           rmd160  ee331fb61efe1099e7e58bafda02c827d8eeabfd \
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</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-                    size    583845
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+homepage            https://bioconductor.org/packages/release/bioc/html/BiocSingular.html
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums           rmd160  2b72badf1be889b4777917ff5ecbbf64e173eec1 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    sha256  cc524a84657c48597865bcc15d405dd8279758d2f5350499c4c3bbfa346d74cc \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    size    24059
</span> 
 depends_lib-append  port:R-beachmat \
                     port:R-BiocGenerics \
<span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-BiocStyle/Portfile b/R/R-BiocStyle/Portfile
</span><span style='display:block; white-space:pre;color:#808080;'>index 6fc5b45092a..e8aa996d764 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/R/R-BiocStyle/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-BiocStyle/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -3,15 +3,17 @@
</span> PortSystem          1.0
 PortGroup           R 1.0
 
<span style='display:block; white-space:pre;background:#ffe0e0;'>-R.setup             bioconductor Bioconductor BiocStyle 2.28.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup             github Bioconductor BiocStyle 7c0e0935315267d796a7bf5a3cd51abe87cfbb5b
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+version             2.29.1
</span> revision            0
 maintainers         nomaintainer
 license             Artistic-2
 description         Provides standard formatting styles for Bioconductor PDF and HTML documents
 long_description    {*}${description}
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</span> supported_archs     noarch
 
 depends_lib-append  port:R-BiocManager \
<span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-biocViews/Portfile b/R/R-biocViews/Portfile
</span><span style='display:block; white-space:pre;color:#808080;'>index 82e78fc850d..051968ad36e 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/R/R-biocViews/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-biocViews/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -3,15 +3,15 @@
</span> PortSystem          1.0
 PortGroup           R 1.0
 
<span style='display:block; white-space:pre;background:#ffe0e0;'>-R.setup             bioconductor Bioconductor biocViews 1.68.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup             bioconductor Bioconductor biocViews 1.68.1
</span> revision            0
 maintainers         nomaintainer
 license             Artistic-2
 description         Categorized views of R package repositories
 long_description    {*}${description}
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</span> supported_archs     noarch
 
 depends_lib-append  port:R-Biobase \
</pre><pre style='margin:0'>

</pre>