<pre style='margin:0'>
Chris Jones (cjones051073) pushed a commit to branch master
in repository macports-ports.
</pre>
<p><a href="https://github.com/macports/macports-ports/commit/368599375fc2f45356abec0fe31f193e9c844bcb">https://github.com/macports/macports-ports/commit/368599375fc2f45356abec0fe31f193e9c844bcb</a></p>
<pre style="white-space: pre; background: #F8F8F8"><span style='display:block; white-space:pre;color:#808000;'>commit 368599375fc2f45356abec0fe31f193e9c844bcb
</span>Author: barracuda156 <vital.had@gmail.com>
AuthorDate: Thu Oct 5 21:58:38 2023 +0800
<span style='display:block; white-space:pre;color:#404040;'> R: move recommended packages into separate ports, use R PG to make them dependencies
</span>---
R/R-CRAN-recommended/Portfile | 43 ++++++++++++++++++++++++++++++++++++++
R/R-KernSmooth/Portfile | 24 +++++++++++++++++++++
R/R-MASS/Portfile | 25 ++++++++++++++++++++++
R/R-Matrix/Portfile | 31 +++++++++++++++++++++++++++
R/R-SASmixed/Portfile | 19 +++++++++++++++++
R/R-boot/Portfile | 23 ++++++++++++++++++++
R/R-class/Portfile | 22 +++++++++++++++++++
R/R-cluster/Portfile | 25 ++++++++++++++++++++++
R/R-codetools/Portfile | 21 +++++++++++++++++++
R/R-foreign/Portfile | 20 ++++++++++++++++++
R/R-lattice/Portfile | 27 ++++++++++++++++++++++++
R/R-mgcv/Portfile | 29 +++++++++++++++++++++++++
R/R-nlme/Portfile | 30 ++++++++++++++++++++++++++
R/R-nnet/Portfile | 21 +++++++++++++++++++
R/R-rpart/Portfile | 22 +++++++++++++++++++
R/R-spatial/Portfile | 21 +++++++++++++++++++
R/R-survival/Portfile | 23 ++++++++++++++++++++
_resources/port1.0/group/R-1.0.tcl | 17 ++++++++-------
math/R/Portfile | 9 ++------
19 files changed, 438 insertions(+), 14 deletions(-)
<span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-CRAN-recommended/Portfile b/R/R-CRAN-recommended/Portfile
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..81f4c8eed80
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>--- /dev/null
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-CRAN-recommended/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,43 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+name R-CRAN-recommended
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+version 1.0.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision 0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+categories R
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers {i0ntempest @i0ntempest} {@barracuda156 gmail.com:vital.had} openmaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+license {GPL-2 GPL-3}
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description Meta-port for CRAN-recommended R packages
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description This meta-port installs R packages recommended by CRAN. \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ Tarballs from CRAN are used.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+distfiles
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+supported_archs noarch
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_build port:R
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_run port:R
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_lib port:R-boot \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-class \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-cluster \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-codetools \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-foreign \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-KernSmooth \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-lattice \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-MASS \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-Matrix \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-mgcv \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-nlme \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-nnet \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-rpart \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-spatial \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-survival
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+use_configure no
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+build { }
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+destroot {
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ file mkdir ${destroot}${prefix}/share/doc/
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ system "echo ${long_description} > ${destroot}${prefix}/share/doc/${name}.README.txt"
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+}
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+livecheck.type none
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-KernSmooth/Portfile b/R/R-KernSmooth/Portfile
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..302c72d86db
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>--- /dev/null
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-KernSmooth/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,24 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortGroup R 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.recommended yes
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup cran cran KernSmooth 2.23-22
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision 0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+license Unlimited
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description Functions for kernel smoothing (and density estimation)
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description {*}${description}. Recommended package.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums rmd160 1381b8c9061df1de47867baf63ab938d33391f57 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ sha256 76e044904606cab79c9edf4eae3ad63ac9d91a2962b44e063075b4b40e8574e9 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ size 25996
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+compilers.setup require_fortran
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_test-append port:R-carData \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-MASS
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run yes
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-MASS/Portfile b/R/R-MASS/Portfile
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..a7d03b86da4
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>--- /dev/null
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-MASS/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,25 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortGroup R 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.recommended yes
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup cran cran MASS 7.3-60
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision 0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+license {GPL-2 GPL-3}
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description Functions and datasets to support MASS (2002)
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description {*}${description}. Recommended package.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+homepage-append https://www.stats.ox.ac.uk/pub/MASS4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums rmd160 c38d0b0740b2ddc5314b93982b49beda82f0b9f2 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ sha256 b802410feab01464d112b27b3501176eb8e68511d4ba9d052ac4db1f2a72f0c2 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ size 561534
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_test-append port:R-lattice \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-nlme \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-nnet \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-survival
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run yes
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-Matrix/Portfile b/R/R-Matrix/Portfile
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..1fe17ddad0e
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>--- /dev/null
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-Matrix/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,31 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortGroup R 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.recommended yes
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup cran r-forge Matrix 1.6-1.1
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision 0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+categories-append math
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+license GPL-2+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description Sparse and dense matrix classes and methods
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description {*}${description}. Recommended package.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+homepage-append https://Matrix.R-forge.R-project.org
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums rmd160 5759b2329008fc036344feb13e0a2c6a8387fcb5 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ sha256 331eb1f1fe9441d4224d8551072443596001b50e8c15618f59cb938b46ee8cc2 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ size 2065748
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# Notice that recommended packages must have all hard dependencies set explicitly.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_lib-append port:R-lattice
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+compilers.setup require_fortran
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_test-append port:R-graph \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-MASS \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-sfsmisc \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-SparseM
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run yes
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-SASmixed/Portfile b/R/R-SASmixed/Portfile
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..b94d7906c73
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>--- /dev/null
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-SASmixed/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,19 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortGroup R 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup cran r-forge SASmixed 1.0-4
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</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers nomaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+license GPL-2+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description SAS System for Mixed Models
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description {*}${description}
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums rmd160 2d7d63dda8d98ee52603a287ae3c4940db8d8caa \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ sha256 75f322378a5d273b257ffac2078865ac3746550a2c5306b9113e723714e92111 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ size 297534
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+supported_archs noarch
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_test-append port:R-lme4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run yes
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-boot/Portfile b/R/R-boot/Portfile
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..639bd235bf2
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</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-boot/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,23 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortGroup R 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.recommended yes
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup cran cran boot 1.3-28.1
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision 0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+license Unlimited
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description Functions and datasets for bootstrapping
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description {*}${description}. Recommended package.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums rmd160 524092c2e5cedb00a0ba309b924c00b9e0066adf \
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</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ size 236854
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+supported_archs noarch
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_test-append port:R-MASS \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-survival
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run yes
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-class/Portfile b/R/R-class/Portfile
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..64fa96c81e4
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</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
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</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
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</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
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</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
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</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
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</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
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</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
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</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,21 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortGroup R 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.recommended yes
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup cran cran nnet 7.3-19
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision 0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+license {GPL-2 GPL-3}
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description Feed-forward neural networks and multinomial log-linear models
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description {*}${description}. Recommended package.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums rmd160 18a3751f140464237588055ff0527017040b5ddf \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ sha256 a9241f469270d3b03bbab7dc0d3c6a06a84010af16ba82fd3bd6660b35382ce7 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ size 29152
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_test-append port:R-MASS
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run yes
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-rpart/Portfile b/R/R-rpart/Portfile
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..159e41227a1
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>--- /dev/null
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-rpart/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,22 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortGroup R 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.recommended yes
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup cran bethatkinson rpart 4.1.19
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision 0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+license {GPL-2 GPL-3}
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description Recursive partitioning and regression trees
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description {*}${description}. Recommended package.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+homepage-append https://github.com/bethatkinson/rpart
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums rmd160 350b1099aa97d3757239fded7ebdd911a674e145 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ sha256 fe723ed0b5583fae8b40e6fecc29b357229cb11f2339b02a4e4f812926249565 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ size 859025
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_test-append port:R-survival
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run yes
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-spatial/Portfile b/R/R-spatial/Portfile
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..1e30ad331fb
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>--- /dev/null
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-spatial/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,21 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortGroup R 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.recommended yes
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup cran cran spatial 7.3-17
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision 0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+license {GPL-2 GPL-3}
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description Functions for Kriging and point pattern analysis
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description {*}${description}. Recommended package.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums rmd160 fe35290fce7e97b1b6ad1a4961e75c39cb9fd0db \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ sha256 f1003ed8cff2a47169a4787c8be46e8c2c501cc06c8b1e5f97bf62507e5f5dd7 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ size 44661
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_test-append port:R-MASS
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run yes
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-survival/Portfile b/R/R-survival/Portfile
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..ac2d70a3480
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>--- /dev/null
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-survival/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,23 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortGroup R 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.recommended yes
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# This is a recommended package. Keep it CRAN-sourced.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup cran therneau survival 3.5-7
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision 0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+license LGPL-2+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description Survival analysis
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description {*}${description}. Recommended package
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+homepage-append https://github.com/therneau/survival
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums rmd160 fb3f2e3657f86f1c2abce6a90770ad9ea13fa037 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ sha256 d50e2dd32add39f0d148c17ec301eeff1ba9b74d9f9674324a9acd5ef234272e \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ size 6724094
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# Notice that recommended packages must have all hard dependencies set explicitly.
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_lib-append port:R-Matrix
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run yes
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/_resources/port1.0/group/R-1.0.tcl b/_resources/port1.0/group/R-1.0.tcl
</span><span style='display:block; white-space:pre;color:#808080;'>index 14999fcccf8..06309725e3a 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/_resources/port1.0/group/R-1.0.tcl
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/_resources/port1.0/group/R-1.0.tcl
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -5,12 +5,12 @@
</span> # Usage:
# PortGroup R 1.0
<span style='display:block; white-space:pre;background:#ffe0e0;'>-PortGroup active_variants 1.1
</span> PortGroup compilers 1.0
# For packages from CRAN and Bioconductor R.author can be set to anything;
# it is desirable however to use GitHub/GitLab author in this field, if available.
<span style='display:block; white-space:pre;background:#ffe0e0;'>-options R.domain R.author R.package R.tag_prefix R.tag_suffix
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+options R.domain R.author R.package R.tag_prefix R.tag_suffix R.recommended
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+default R.recommended no
</span>
proc R.setup {domain author package version {R_tag_prefix ""} {R_tag_suffix ""}} {
global R.domain R.author R.package R.tag_prefix R.tag_suffix
<span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -50,8 +50,7 @@ proc R.setup {domain author package version {R_tag_prefix ""} {R_tag_suffix ""}}
</span> master_sites https://${R.author}.r-universe.dev/src/contrib
distname ${R.package}_${version}
worksrcdir ${R.package}
<span style='display:block; white-space:pre;background:#ffe0e0;'>- livecheck.type regex
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- livecheck.regex [quotemeta ${R.package}]_(\[0-9.\]+).tar.gz
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ livecheck.type none
</span> }
# Packages seem to get updated on Bioconductor in bulk few times a year.
# Up-to-date versions can be found on GitHub instead.
<span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -97,7 +96,7 @@ default_variants-append +gcc12
</span> port::register_callback R.add_dependencies
proc R.add_dependencies {} {
<span style='display:block; white-space:pre;background:#ffe0e0;'>- global configure.compiler
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ global configure.compiler R.recommended
</span> if {[string match macports-clang-* ${configure.compiler}]} {
set clang_v [
string range ${configure.compiler} [
<span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -122,9 +121,13 @@ proc R.add_dependencies {} {
</span> depends_build-append \
port:R
depends_run-append port:R
<span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ if {![option R.recommended]} {
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ # The following is a meta-port installing recommended packages:
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ depends_lib-append \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ port:R-CRAN-recommended
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ }
</span> }
<span style='display:block; white-space:pre;background:#ffe0e0;'>-# R installs few basic packages as recommended, and those are needed for some other packages.
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-require_active_variants R recommended
</span>
# General fixes for PPC:
global build_arch os.platform
<span style='display:block; white-space:pre;color:#808080;'>diff --git a/math/R/Portfile b/math/R/Portfile
</span><span style='display:block; white-space:pre;color:#808080;'>index 98667b24cf5..d3dde435c8d 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/math/R/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/math/R/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -163,7 +163,7 @@ configure.env-append ac_cv_path_TEX= \
</span> ac_cv_path_PDFLATEX=
if {${os.platform} eq "darwin" && ${os.major} < 13} {
<span style='display:block; white-space:pre;background:#ffe0e0;'>- configure.args-append --disable-openmp
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+ configure.args-append --disable-openmp
</span> }
# See https://trac.macports.org/ticket/64204 for more info
<span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -221,11 +221,6 @@ variant debug description {build with debug symbols} {
</span> configure.optflags-append -g
}
<span style='display:block; white-space:pre;background:#ffe0e0;'>-variant recommended description {install recommended R packages} {
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- configure.args-delete --without-recommended-packages
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>- configure.args-append --with-recommended-packages
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-}
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-
</span> variant latex description {build with LaTeX support and docs in PDF} {
depends_build-append port:texlive-basic \
port:texlive-latex \
<span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -273,7 +268,7 @@ variant java description {enable Java} {
</span> configure.args-replace --disable-java --enable-java
}
<span style='display:block; white-space:pre;background:#ffe0e0;'>-default_variants +cairo +tcltk +recommended +openmp
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+default_variants +cairo +tcltk +openmp
</span>
if {![variant_isset quartz]} {
default_variants-append +x11
</pre><pre style='margin:0'>
</pre>