<pre style='margin:0'>
Renee Otten (reneeotten) pushed a commit to branch master
in repository macports-ports.

</pre>
<p><a href="https://github.com/macports/macports-ports/commit/b4e9f83192e8bdff9441ded74c8a1ab86408dbbd">https://github.com/macports/macports-ports/commit/b4e9f83192e8bdff9441ded74c8a1ab86408dbbd</a></p>
<pre style="white-space: pre; background: #F8F8F8"><span style='display:block; white-space:pre;color:#808000;'>commit b4e9f83192e8bdff9441ded74c8a1ab86408dbbd
</span>Author: barracuda156 <vital.had@gmail.com>
AuthorDate: Fri Oct 27 01:52:00 2023 +0800

<span style='display:block; white-space:pre;color:#404040;'>    R-MultiAssayExperiment: update to 1.29.0, support testing
</span>---
 R/R-MultiAssayExperiment/Portfile                  | 27 ++++++++++++++++------
 .../files/patch-no-maftools.diff                   | 10 ++++++++
 R/R-UpSetR/Portfile                                | 24 +++++++++++++++++++
 3 files changed, 54 insertions(+), 7 deletions(-)

<span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-MultiAssayExperiment/Portfile b/R/R-MultiAssayExperiment/Portfile
</span><span style='display:block; white-space:pre;color:#808080;'>index 404e16c1bf0..bc99e657271 100644
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>--- a/R/R-MultiAssayExperiment/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-MultiAssayExperiment/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -3,18 +3,17 @@
</span> PortSystem          1.0
 PortGroup           R 1.0
 
<span style='display:block; white-space:pre;background:#ffe0e0;'>-R.setup             github waldronlab MultiAssayExperiment a253dec8a199af0099e5f8ccf0ff225baa499de7
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-version             1.27.5
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup             github waldronlab MultiAssayExperiment a04fa9191a6939f5a77f1cccc66ae89242a431af
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+version             1.29.0
</span> revision            0
 maintainers         nomaintainer
 license             Artistic-2
 description         Software for the integration of multi-omics experiments in Bioconductor
 long_description    {*}${description}
<span style='display:block; white-space:pre;background:#ffe0e0;'>-homepage            https://waldronlab.io/MultiAssayExperiment \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-                    https://bioconductor.org/packages/release/bioc/html/MultiAssayExperiment.html
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-checksums           rmd160  798dd6abf995f4dc09f5f2950e07a89f5ec90741 \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-                    sha256  d32ed59516a3a9b46b17d91b20a28ae9143aa3ce5932ed862352197f1dfd35ea \
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>-                    size    373677
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+homepage            https://waldronlab.io/MultiAssayExperiment
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums           rmd160  a7027d102fad926bb74c16c7a33adf035f43d138 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    sha256  4cb01076ed5fcfb243132d20195dd8394cd485deb3f81c7bd5d61720da27e83d \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    size    373682
</span> supported_archs     noarch
 
 depends_lib-append  port:R-Biobase \
<span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -26,3 +25,17 @@ depends_lib-append  port:R-Biobase \
</span>                     port:R-S4Vectors \
                     port:R-SummarizedExperiment \
                     port:R-tidyr
<span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+patchfiles          patch-no-maftools.diff
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_test-append port:R-BiocStyle \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-HDF5Array \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-knitr \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-R.rsp \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-RaggedExperiment \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-rmarkdown \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-survminer \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-testthat \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-UpSetR
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run            yes
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-MultiAssayExperiment/files/patch-no-maftools.diff b/R/R-MultiAssayExperiment/files/patch-no-maftools.diff
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..72ed421e132
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>--- /dev/null
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-MultiAssayExperiment/files/patch-no-maftools.diff
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,10 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+--- DESCRIPTION    2023-10-24 22:49:00.000000000 +0800
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>++++ DESCRIPTION    2023-10-27 01:32:33.000000000 +0800
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+@@ -33,7 +33,6 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+     BiocStyle,
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+     HDF5Array (>= 1.19.17),
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+     knitr,
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+-    maftools (>= 2.7.10),
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+     rmarkdown,
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+     R.rsp,
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+     RaggedExperiment,
</span><span style='display:block; white-space:pre;color:#808080;'>diff --git a/R/R-UpSetR/Portfile b/R/R-UpSetR/Portfile
</span>new file mode 100644
<span style='display:block; white-space:pre;color:#808080;'>index 00000000000..55fc7fca9a6
</span><span style='display:block; white-space:pre;background:#ffe0e0;'>--- /dev/null
</span><span style='display:block; white-space:pre;background:#e0e0ff;'>+++ b/R/R-UpSetR/Portfile
</span><span style='display:block; white-space:pre;background:#e0e0e0;'>@@ -0,0 +1,24 @@
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortSystem          1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+PortGroup           R 1.0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+R.setup             github hms-dbmi UpSetR 1.4.0 v
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+revision            0
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+maintainers         nomaintainer
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+license             MIT
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+description         More scalable alternative to Venn and Euler diagrams for visualizing intersecting sets
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+long_description    {*}${description}
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+checksums           rmd160  70206e88c5435ae8903d25152e2384ffbcb1c2c4 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    sha256  23e9faa026e72c1e06db5267e398658436a40329b154aed62319f8375539befa \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    size    7647818
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+supported_archs     noarch
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_lib-append  port:R-ggplot2 \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-gridExtra \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-plyr \
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+                    port:R-scales
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+depends_test-append port:R-knitr
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+
</span><span style='display:block; white-space:pre;background:#e0ffe0;'>+test.run            yes
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</pre>