[MacPorts] #43802: Pymol stopped working
MacPorts
noreply at macports.org
Fri May 23 09:45:25 PDT 2014
#43802: Pymol stopped working
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Reporter: matteo.tiberti@… | Owner: macports-tickets@…
Type: defect | Status: new
Priority: High | Milestone:
Component: ports | Version: 2.2.1
Keywords: pymol | Port: pymol
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Hello,
I'm trying to use PyMOL 1.6.0 on Mac OSX
Mavericks, installed through MacPorts, but the same happens with pymol
1.7.1 as well (see ticket #42860).
Up to a couple of days ago everything was working perfectly fine. At a
certain point I have probably upgraded the installed base (selfupdate +
upgrade outdated), and now when I run pymol I get an error (log file
attached) and then PyMOL crashes.
I have then tried the following:
- reinstalled PyMOL 1.6.0
- removed PyMOL 1.6.0 and installed 1.7.1
- updated the XQuartz X server to the latest version
- reinstalled the XQuartz X server to an older version
- wiped MacPorts clean and reinstalled PyMOL and its prerequisites from
scratch
- installed the gfxCardStatus program and tried both using the integrated
gpu and the discrete one
- searched on the internet (of course :) )
I have then asked for assistance in the PyMOL mailing list, and Thomas
Holder, a PyMOL developer from Schrodinger, confirmed
that he was experiencing the same. It looks like the issue only happens
when PyMOL is built in the macports environment, and it's not related to
any recent changes to PyMOL. This means that most likely something in
macports got broken in the meanwhile.
Thanks for your attention
--
Ticket URL: <https://trac.macports.org/ticket/43802>
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