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<div class="moz-cite-prefix">On 11/10/2019 15:34 PM, Chris Jones
wrote:<br>
</div>
<blockquote type="cite"
cite="mid:ccbdf59f-c554-3d86-75a2-ea7aa3d0dc19@hep.phy.cam.ac.uk">Hi,
<br>
<br>
Are you *really* sure you rebuilt *all* your ports natively for
Darwin19 (macOS10.15) ? Your output suggests not, i.e. from the
first part
<br>
<br>
> Driving: gfortran test.f90 -v -mmacosx-version-min=10.15.0
<br>
> -asm_macosx_version_min=10.15 -l gfortran -shared-libgcc
<br>
> Using built-in specs.
<br>
> COLLECT_GCC=gfortran
<br>
>
COLLECT_LTO_WRAPPER=/opt/local/libexec/gcc/x86_64-apple-darwin18/9.2.0/lto-wrapper<br>
> Target: x86_64-apple-darwin18
<br>
<br>
See Darwin 18 there. That is wrong, it should be 19, as in my
output
<br>
<br>
Oberon ~/cernbox/MacPorts > gfortran-mp-9 -v test.f90
<br>
Driving: gfortran-mp-9 -v test.f90 -mmacosx-version-min=10.15.0
-asm_macosx_version_min=10.15 -l gfortran -shared-libgcc
<br>
Using built-in specs.
<br>
COLLECT_GCC=gfortran-mp-9
<br>
COLLECT_LTO_WRAPPER=/opt/local/libexec/gcc/x86_64-apple-darwin19/9.2.0/lto-wrapper
<br>
Target: x86_64-apple-darwin19
<br>
<br>
<br>
I suspect you are using a gcc build (and probably others as well)
that where built for macOS10.14, not macOS10.15.
<br>
<br>
Following the migration guide exactly is not optional I am
afraid....
<br>
</blockquote>
<p><br>
</p>
<p>This is what I did supposingly but with xcode11.0... but anyway,
I will try again with the new xcode.</p>
<p>I will maintain you informed... it happened to other people in
the office so if I solve this many people will be happy ;o)<br>
</p>
<p>Thanks a lot,</p>
<p>g.<br>
</p>
<blockquote type="cite"
cite="mid:ccbdf59f-c554-3d86-75a2-ea7aa3d0dc19@hep.phy.cam.ac.uk">
<br>
cheers Chris
<br>
<br>
On 11/10/2019 1:41 pm, Guillaume Houzeaux @ BSC wrote:
<br>
<blockquote type="cite">Chris, thanks a lot for your very quick
answer!
<br>
<br>
1. I followed the path for migration and reinstalled all
packages. I will try to do it once more to be sure.
<br>
2. Xcode version: 11.0
<br>
3. My test program is minimum:
<br>
<br>
program test
<br>
print*,'a'
<br>
end program test
<br>
<br>
4. The output with -v option is:
<br>
<br>
Driving: gfortran test.f90 -v -mmacosx-version-min=10.15.0
-asm_macosx_version_min=10.15 -l gfortran -shared-libgcc
<br>
Using built-in specs.
<br>
COLLECT_GCC=gfortran
<br>
COLLECT_LTO_WRAPPER=/opt/local/libexec/gcc/x86_64-apple-darwin18/9.2.0/lto-wrapper
<br>
Target: x86_64-apple-darwin18
<br>
Configured with:
/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_lang_gcc9/gcc9/work/gcc-9.2.0/configure
--prefix=/opt/local --build=x86_64-apple-darwin18
--enable-languages=c,c++,objc,obj-c++,lto,fortran
--libdir=/opt/local/lib/gcc9
--includedir=/opt/local/include/gcc9
--infodir=/opt/local/share/info --mandir=/opt/local/share/man
--datarootdir=/opt/local/share/gcc-9
--with-local-prefix=/opt/local --with-system-zlib --disable-nls
--program-suffix=-mp-9
--with-gxx-include-dir=/opt/local/include/gcc9/c++/
--with-gmp=/opt/local --with-mpfr=/opt/local
--with-mpc=/opt/local --with-isl=/opt/local
--enable-stage1-checking --disable-multilib --enable-lto
--enable-libstdcxx-time --with-build-config=bootstrap-debug
--with-as=/opt/local/bin/as --with-ld=/opt/local/bin/ld
--with-ar=/opt/local/bin/ar
--with-bugurl=<a class="moz-txt-link-freetext" href="https://trac.macports.org/newticket">https://trac.macports.org/newticket</a> --disable-tls
--with-pkgversion='MacPorts gcc9 9.2.0_0'
--with-sysroot=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk<br>
Thread model: posix
<br>
gcc version 9.2.0 (MacPorts gcc9 9.2.0_0)
<br>
COLLECT_GCC_OPTIONS='-v' '-mmacosx-version-min=10.15.0'
'-asm_macosx_version_min=10.15' '-shared-libgcc' '-mtune=core2'
<br>
/opt/local/libexec/gcc/x86_64-apple-darwin18/9.2.0/f951
test.f90 -fPIC -quiet -dumpbase test.f90
-mmacosx-version-min=10.15.0 -mtune=core2 -auxbase test -version
-fintrinsic-modules-path
/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/finclude -o
/var/folders/1z/j0r1q88d2_95cj4fd50r39mr0000gr/T//ccZubFPj.s
<br>
GNU Fortran (MacPorts gcc9 9.2.0_0) version 9.2.0
(x86_64-apple-darwin18)
<br>
compiled by GNU C version 9.2.0, GMP version 6.1.2, MPFR
version 4.0.2, MPC version 1.1.0, isl version isl-0.21-GMP
<br>
<br>
GGC heuristics: --param ggc-min-expand=100 --param
ggc-min-heapsize=131072
<br>
GNU Fortran2008 (MacPorts gcc9 9.2.0_0) version 9.2.0
(x86_64-apple-darwin18)
<br>
compiled by GNU C version 9.2.0, GMP version 6.1.2, MPFR
version 4.0.2, MPC version 1.1.0, isl version isl-0.21-GMP
<br>
<br>
GGC heuristics: --param ggc-min-expand=100 --param
ggc-min-heapsize=131072
<br>
COLLECT_GCC_OPTIONS='-v' '-mmacosx-version-min=10.15.0'
'-shared-libgcc' '-mtune=core2'
<br>
/opt/local/bin/as -arch x86_64 -v -force_cpusubtype_ALL
-mmacosx-version-min=10.15 -o
/var/folders/1z/j0r1q88d2_95cj4fd50r39mr0000gr/T//cce0rRJI.o
/var/folders/1z/j0r1q88d2_95cj4fd50r39mr0000gr/T//ccZubFPj.s
<br>
Apple clang version 11.0.0 (clang-1100.0.33.8)
<br>
Target: x86_64-apple-darwin19.0.0
<br>
Thread model: posix
<br>
InstalledDir:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin<br>
"/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang"
-cc1as -triple x86_64-apple-macosx10.15.0 -filetype obj
-main-file-name ccZubFPj.s -target-cpu penryn
-fdebug-compilation-dir /Users/houzeaux/Desktop
-dwarf-debug-producer Apple clang version 11.0.0
(clang-1100.0.33.8) -dwarf-version=4 -mrelocation-model pic -o
/var/folders/1z/j0r1q88d2_95cj4fd50r39mr0000gr/T//cce0rRJI.o
/var/folders/1z/j0r1q88d2_95cj4fd50r39mr0000gr/T//ccZubFPj.s
<br>
Reading specs from
/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/../../../libgfortran.spec<br>
rename spec lib to liborig
<br>
COLLECT_GCC_OPTIONS='-v' '-mmacosx-version-min=10.15.0'
'-shared-libgcc' '-mtune=core2'
<br>
COMPILER_PATH=/opt/local/libexec/gcc/x86_64-apple-darwin18/9.2.0/:/opt/local/libexec/gcc/x86_64-apple-darwin18/9.2.0/:/opt/local/libexec/gcc/x86_64-apple-darwin18/:/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/:/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/
<br>
LIBRARY_PATH=/usr/lib/:/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/:/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/../../../
<br>
COLLECT_GCC_OPTIONS='-v' '-mmacosx-version-min=10.15.0'
'-shared-libgcc' '-mtune=core2'
<br>
/opt/local/libexec/gcc/x86_64-apple-darwin18/9.2.0/collect2
-syslibroot
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/
-dynamic -arch x86_64 -macosx_version_min 10.15.0
-weak_reference_mismatches non-weak -o a.out
-L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0
-L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/../../..
/var/folders/1z/j0r1q88d2_95cj4fd50r39mr0000gr/T//cce0rRJI.o
-lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc
-lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v
<br>
collect2 version 9.2.0
<br>
/opt/local/bin/ld -syslibroot
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/
-dynamic -arch x86_64 -macosx_version_min 10.15.0
-weak_reference_mismatches non-weak -o a.out
-L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0
-L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/../../..
/var/folders/1z/j0r1q88d2_95cj4fd50r39mr0000gr/T//cce0rRJI.o
-lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc
-lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v
<br>
@(#)PROGRAM:ld PROJECT:ld64-512.4
<br>
BUILD 05:06:53 Aug 16 2019
<br>
configured to support archs: armv6 armv7 armv7s arm64 arm64e
arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em
<br>
Library search paths:
<br>
/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0
<br>
/opt/local/lib/gcc9
<br>
Framework search paths:
<br>
ld: library not found for -lSystem
<br>
collect2: error: ld returned 1 exit status
<br>
<br>
<br>
<blockquote type="cite">
<br>
one more request.
<br>
<br>
please post the full output from compiling your test code with
the -v option.
<br>
<br>
cheers Chris
<br>
<br>
On 11/10/2019 12:59 pm, Chris Jones wrote:
<br>
<blockquote type="cite">
<br>
can you please direct us to the exact test application code
you are using ?
<br>
<br>
Also, can you confirm the exact Xcode version you are using
?
<br>
<br>
Have you correctly followed the macports migration guide
after updating your OS ?
<br>
<br>
<a class="moz-txt-link-freetext" href="https://trac.macports.org/wiki/Migration">https://trac.macports.org/wiki/Migration</a>
<br>
<br>
cheers Chris
<br>
<br>
On 11/10/2019 12:55 pm, Guillaume Houzeaux @ BSC wrote:
<br>
<blockquote type="cite">Hello,
<br>
<br>
I'm compiling with gfortran9 on catalina and get this
error:
<br>
<br>
gfortran test.f90
<br>
ld: library not found for -lSystem
<br>
collect2: error: ld returned 1 exit status
<br>
<br>
Seems that it does not find the library libSystem. I
changed all the library paths in my bash_profile
<br>
<br>
to include /usr/lib but does not work. The only solution
for the moment is to compile with
<br>
<br>
gfortran test.f90-L/usr/lib
<br>
<br>
but this is not a practical option... Any idea on how to
fix this?
<br>
<br>
Thanks in advance
<br>
<br>
-- <br>
Guillaume Houzeaux
<br>
Team Leader
<br>
Dpt. Computer Applications in Science and Engineering
<br>
Barcelona Supercomputing Center (BSC-CNS)
<br>
Edificio NEXUS II - Office 3A, c) Jordi Girona 29
<br>
08034 Barcelona, Spain
<br>
<br>
Location:
<a class="moz-txt-link-rfc2396E" href="https://www.google.es/maps/place/Carrer+de+Jordi+Girona,+08034+Barcelona/@41.3881175,2.1132195,17z/data=!3m1!4b1!4m8!1m2!10m1!1e2!3m4!1s0x12a4985099390467:0xd9abcf1987739b3e!8m2!3d41.3881175!4d2.1154135?hl=en"><https://www.google.es/maps/place/Carrer+de+Jordi+Girona,+08034+Barcelona/@41.3881175,2.1132195,17z/data=!3m1!4b1!4m8!1m2!10m1!1e2!3m4!1s0x12a4985099390467:0xd9abcf1987739b3e!8m2!3d41.3881175!4d2.1154135?hl=en></a>
<br>
Tel: +34 93 413 7781
<br>
Skype user: guillaume_houzeaux_bsc
<br>
WWW: BSC profile
<a class="moz-txt-link-rfc2396E" href="https://www.bsc.es/houzeaux-guillaume"><https://www.bsc.es/houzeaux-guillaume></a>
<br>
ResearcherID: D-4950-2012
<br>
Scientific Profile:
<a class="moz-txt-link-rfc2396E" href="https://www.researchgate.net/profile/Guillaume_Houzeaux"><https://www.researchgate.net/profile/Guillaume_Houzeaux></a>
<a class="moz-txt-link-rfc2396E" href="http://scholar.google.es/citations?user=cL9khdYAAAAJ&hl=en"><http://scholar.google.es/citations?user=cL9khdYAAAAJ&hl=en></a>
<a class="moz-txt-link-rfc2396E" href="http://orcid.org/0000-0002-2592-1426"><http://orcid.org/0000-0002-2592-1426></a>
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<br>
<br>
</blockquote>
</blockquote>
</blockquote>
<br>
-- <br>
Guillaume Houzeaux
<br>
Team Leader
<br>
Dpt. Computer Applications in Science and Engineering
<br>
Barcelona Supercomputing Center (BSC-CNS)
<br>
Edificio NEXUS II - Office 3A, c) Jordi Girona 29
<br>
08034 Barcelona, Spain
<br>
<br>
Location:
<a class="moz-txt-link-rfc2396E" href="https://www.google.es/maps/place/Carrer+de+Jordi+Girona,+08034+Barcelona/@41.3881175,2.1132195,17z/data=!3m1!4b1!4m8!1m2!10m1!1e2!3m4!1s0x12a4985099390467:0xd9abcf1987739b3e!8m2!3d41.3881175!4d2.1154135?hl=en"><https://www.google.es/maps/place/Carrer+de+Jordi+Girona,+08034+Barcelona/@41.3881175,2.1132195,17z/data=!3m1!4b1!4m8!1m2!10m1!1e2!3m4!1s0x12a4985099390467:0xd9abcf1987739b3e!8m2!3d41.3881175!4d2.1154135?hl=en></a>
<br>
Tel: +34 93 413 7781
<br>
Skype user: guillaume_houzeaux_bsc
<br>
WWW: BSC profile <a class="moz-txt-link-rfc2396E" href="https://www.bsc.es/houzeaux-guillaume"><https://www.bsc.es/houzeaux-guillaume></a>
<br>
ResearcherID: D-4950-2012
<br>
Scientific Profile:
<a class="moz-txt-link-rfc2396E" href="https://www.researchgate.net/profile/Guillaume_Houzeaux"><https://www.researchgate.net/profile/Guillaume_Houzeaux></a>
<a class="moz-txt-link-rfc2396E" href="http://scholar.google.es/citations?user=cL9khdYAAAAJ&hl=en"><http://scholar.google.es/citations?user=cL9khdYAAAAJ&hl=en></a>
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<br>
<br>
</blockquote>
</blockquote>
<p><br>
</p>
<div class="moz-signature">-- <br>
<font size="4" face="Garamond, Times">
Guillaume Houzeaux<br>
Team Leader<br>
Dpt. Computer Applications in Science and Engineering<br>
Barcelona Supercomputing Center (BSC-CNS)<br>
Edificio NEXUS II - Office 3A, c) Jordi Girona 29<br>
08034 Barcelona, Spain<br>
<br>
Location: <a
href="https://www.google.es/maps/place/Carrer+de+Jordi+Girona,+08034+Barcelona/@41.3881175,2.1132195,17z/data=!3m1!4b1!4m8!1m2!10m1!1e2!3m4!1s0x12a4985099390467:0xd9abcf1987739b3e!8m2!3d41.3881175!4d2.1154135?hl=en"><img
src="cid:part1.E2B13A82.42F5E6C1@bsc.es" height="15"></a> <br>
Tel: +34 93 413 7781<br>
Skype user: guillaume_houzeaux_bsc<br>
WWW: <a href="https://www.bsc.es/houzeaux-guillaume">BSC
profile</a> <br>
ResearcherID: D-4950-2012 <br>
Scientific Profile: <a
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<a href="http://orcid.org/0000-0002-2592-1426"> ORCID <img 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