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<div class="moz-cite-prefix">Ok Chris,</div>
<div class="moz-cite-prefix"><br>
</div>
<div class="moz-cite-prefix">I'm installing xcode 11.1 from the app
store. Should I go through the migration steps again afterwards?</div>
<div class="moz-cite-prefix"><br>
</div>
<div class="moz-cite-prefix">Guillaume<br>
</div>
<blockquote type="cite"
cite="mid:208ecaa7-ab63-6367-1922-515afdf23cfd@hep.phy.cam.ac.uk">
<br>
<br>
On 11/10/2019 2:22 pm, Guillaume Houzeaux @ BSC wrote:
<br>
<blockquote type="cite">Chris,
<br>
<blockquote type="cite">
<br>
<br>
On 11/10/2019 1:41 pm, Guillaume Houzeaux @ BSC wrote:
<br>
<blockquote type="cite">Chris, thanks a lot for your very
quick answer!
<br>
<br>
1. I followed the path for migration and reinstalled all
packages. I will try to do it once more to be sure.
<br>
2. Xcode version: 11.0
<br>
</blockquote>
<br>
Please update to 11.1. 11.0 indeed has a number of issues
since fixed.
<br>
</blockquote>
<br>
I get no updates available :o(
<br>
</blockquote>
<br>
I think I saw the same. try a search for Xcode in the App store
and update from there....
<br>
<br>
<blockquote type="cite">
<br>
I will try from developer.apple.com
<br>
<br>
<blockquote type="cite">
<br>
<blockquote type="cite">Reading specs from
/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/../../../libgfortran.spec<br>
rename spec lib to liborig
<br>
COLLECT_GCC_OPTIONS='-v' '-mmacosx-version-min=10.15.0'
'-shared-libgcc' '-mtune=core2'
<br>
COMPILER_PATH=/opt/local/libexec/gcc/x86_64-apple-darwin18/9.2.0/:/opt/local/libexec/gcc/x86_64-apple-darwin18/9.2.0/:/opt/local/libexec/gcc/x86_64-apple-darwin18/:/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/:/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/
<br>
LIBRARY_PATH=/usr/lib/:/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/:/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/../../../
<br>
COLLECT_GCC_OPTIONS='-v' '-mmacosx-version-min=10.15.0'
'-shared-libgcc' '-mtune=core2'
<br>
/opt/local/libexec/gcc/x86_64-apple-darwin18/9.2.0/collect2
-syslibroot
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/
-dynamic -arch x86_64 -macosx_version_min 10.15.0
-weak_reference_mismatches non-weak -o a.out
-L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0
-L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/../../..
/var/folders/1z/j0r1q88d2_95cj4fd50r39mr0000gr/T//cce0rRJI.o
-lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc
-lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v
<br>
collect2 version 9.2.0
<br>
/opt/local/bin/ld -syslibroot
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/
</blockquote>
<br>
<br>
This I think is your problem. You are using the 10.14 SDK, not
the 10.15 one. Does
<br>
<br>
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk
<br>
<br>
even exist on your system ? I guess not.
<br>
</blockquote>
nope, it does not exist
<br>
<blockquote type="cite">
<br>
Chris
<br>
<br>
<blockquote type="cite">-dynamic -arch x86_64
-macosx_version_min 10.15.0 -weak_reference_mismatches
non-weak -o a.out
-L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0
-L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0/../../..
/var/folders/1z/j0r1q88d2_95cj4fd50r39mr0000gr/T//cce0rRJI.o
-lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc
-lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v
<br>
@(#)PROGRAM:ld PROJECT:ld64-512.4
<br>
BUILD 05:06:53 Aug 16 2019
<br>
configured to support archs: armv6 armv7 armv7s arm64 arm64e
arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em
<br>
Library search paths:
<br>
/opt/local/lib/gcc9/gcc/x86_64-apple-darwin18/9.2.0
<br>
/opt/local/lib/gcc9
<br>
Framework search paths:
<br>
ld: library not found for -lSystem
<br>
collect2: error: ld returned 1 exit status
<br>
<br>
<br>
<blockquote type="cite">
<br>
one more request.
<br>
<br>
please post the full output from compiling your test code
with the -v option.
<br>
<br>
cheers Chris
<br>
<br>
On 11/10/2019 12:59 pm, Chris Jones wrote:
<br>
<blockquote type="cite">
<br>
can you please direct us to the exact test application
code you are using ?
<br>
<br>
Also, can you confirm the exact Xcode version you are
using ?
<br>
<br>
Have you correctly followed the macports migration guide
after updating your OS ?
<br>
<br>
<a class="moz-txt-link-freetext" href="https://trac.macports.org/wiki/Migration">https://trac.macports.org/wiki/Migration</a>
<br>
<br>
cheers Chris
<br>
<br>
On 11/10/2019 12:55 pm, Guillaume Houzeaux @ BSC wrote:
<br>
<blockquote type="cite">Hello,
<br>
<br>
I'm compiling with gfortran9 on catalina and get this
error:
<br>
<br>
gfortran test.f90
<br>
ld: library not found for -lSystem
<br>
collect2: error: ld returned 1 exit status
<br>
<br>
Seems that it does not find the library libSystem. I
changed all the library paths in my bash_profile
<br>
<br>
to include /usr/lib but does not work. The only
solution for the moment is to compile with
<br>
<br>
gfortran test.f90-L/usr/lib
<br>
<br>
but this is not a practical option... Any idea on how
to fix this?
<br>
<br>
Thanks in advance
<br>
<br>
-- <br>
Guillaume Houzeaux
<br>
Team Leader
<br>
Dpt. Computer Applications in Science and Engineering
<br>
Barcelona Supercomputing Center (BSC-CNS)
<br>
Edificio NEXUS II - Office 3A, c) Jordi Girona 29
<br>
08034 Barcelona, Spain
<br>
<br>
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<br>
<br>
</blockquote>
</blockquote>
</blockquote>
<br>
-- <br>
Guillaume Houzeaux
<br>
Team Leader
<br>
Dpt. Computer Applications in Science and Engineering
<br>
Barcelona Supercomputing Center (BSC-CNS)
<br>
Edificio NEXUS II - Office 3A, c) Jordi Girona 29
<br>
08034 Barcelona, Spain
<br>
<br>
Location:
<a class="moz-txt-link-rfc2396E" href="https://www.google.es/maps/place/Carrer+de+Jordi+Girona,+08034+Barcelona/@41.3881175,2.1132195,17z/data=!3m1!4b1!4m8!1m2!10m1!1e2!3m4!1s0x12a4985099390467:0xd9abcf1987739b3e!8m2!3d41.3881175!4d2.1154135?hl=en"><https://www.google.es/maps/place/Carrer+de+Jordi+Girona,+08034+Barcelona/@41.3881175,2.1132195,17z/data=!3m1!4b1!4m8!1m2!10m1!1e2!3m4!1s0x12a4985099390467:0xd9abcf1987739b3e!8m2!3d41.3881175!4d2.1154135?hl=en></a>
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<br>
<br>
</blockquote>
</blockquote>
Thanks again,
<br>
<br>
g.
<br>
<br>
-- <br>
Guillaume Houzeaux
<br>
Team Leader
<br>
Dpt. Computer Applications in Science and Engineering
<br>
Barcelona Supercomputing Center (BSC-CNS)
<br>
Edificio NEXUS II - Office 3A, c) Jordi Girona 29
<br>
08034 Barcelona, Spain
<br>
<br>
Location:
<a class="moz-txt-link-rfc2396E" href="https://www.google.es/maps/place/Carrer+de+Jordi+Girona,+08034+Barcelona/@41.3881175,2.1132195,17z/data=!3m1!4b1!4m8!1m2!10m1!1e2!3m4!1s0x12a4985099390467:0xd9abcf1987739b3e!8m2!3d41.3881175!4d2.1154135?hl=en"><https://www.google.es/maps/place/Carrer+de+Jordi+Girona,+08034+Barcelona/@41.3881175,2.1132195,17z/data=!3m1!4b1!4m8!1m2!10m1!1e2!3m4!1s0x12a4985099390467:0xd9abcf1987739b3e!8m2!3d41.3881175!4d2.1154135?hl=en></a>
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<br>
</blockquote>
</blockquote>
<p><br>
</p>
<div class="moz-signature">-- <br>
<font size="4" face="Garamond, Times">
Guillaume Houzeaux<br>
Team Leader<br>
Dpt. Computer Applications in Science and Engineering<br>
Barcelona Supercomputing Center (BSC-CNS)<br>
Edificio NEXUS II - Office 3A, c) Jordi Girona 29<br>
08034 Barcelona, Spain<br>
<br>
Location: <a
href="https://www.google.es/maps/place/Carrer+de+Jordi+Girona,+08034+Barcelona/@41.3881175,2.1132195,17z/data=!3m1!4b1!4m8!1m2!10m1!1e2!3m4!1s0x12a4985099390467:0xd9abcf1987739b3e!8m2!3d41.3881175!4d2.1154135?hl=en"><img
src="cid:part1.1320B9C3.0DE2CCD1@bsc.es" height="15"></a> <br>
Tel: +34 93 413 7781<br>
Skype user: guillaume_houzeaux_bsc<br>
WWW: <a href="https://www.bsc.es/houzeaux-guillaume">BSC
profile</a> <br>
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<a href="http://orcid.org/0000-0002-2592-1426"> ORCID <img 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