<div dir="ltr">Hello Jianxin,<div><br></div><div>Did you try running the testsuite (port test xcrysden) or trying some other examples?</div><div><br></div><div>David</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Sat, Mar 11, 2023 at 4:14 PM Zhu, Jianxin via macports-users <<a href="mailto:macports-users@lists.macports.org">macports-users@lists.macports.org</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div class="msg-4817224012458943547">
<div lang="EN-US" style="overflow-wrap: break-word;">
<div class="m_-4817224012458943547WordSection1">
<p class="MsoNormal"><span style="font-size:11pt">Hello, <u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt">I recently upgraded my Macbook computer (intel processor) OS to Ventura and reinstalled MacPorts.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt">After I port installed xcrysden (1.6.2), I try to visualize a Wien2k struct file.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt">But the program is stuck at the following and no image comes up.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt">Any help is appreciated. <u></u>
<u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt">Thanks, <u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt">Jianxin<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt"><u></u> <u></u></span></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">+-----------------------------------------------------------------+</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|*****************************************************************|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|* </span><span class="m_-4817224012458943547apple-converted-space">
</span><span class="m_-4817224012458943547s1">*|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|*</span><span class="m_-4817224012458943547apple-converted-space"> </span>
<span class="m_-4817224012458943547s1">XCrySDen -- (X-Window) CRYstalline Structures and DENsities</span><span class="m_-4817224012458943547apple-converted-space">
</span><span class="m_-4817224012458943547s1">*|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|* </span><span class="m_-4817224012458943547apple-converted-space">
</span><span class="m_-4817224012458943547s1">= </span><span class="m_-4817224012458943547apple-converted-space"> </span>
<span class="m_-4817224012458943547s1">=== </span><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">=</span><span class="m_-4817224012458943547apple-converted-space">
</span><span class="m_-4817224012458943547s1">===</span><span class="m_-4817224012458943547apple-converted-space"> </span>
<span class="m_-4817224012458943547s1">*|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|*---------------------------------------------------------------*|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|* </span><span class="m_-4817224012458943547apple-converted-space">
</span><span class="m_-4817224012458943547s1">*|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|*</span><span class="m_-4817224012458943547apple-converted-space"> </span>
<span class="m_-4817224012458943547s1">Anton Kokalj (<a href="mailto:tone.kokalj@ijs.si" target="_blank">tone.kokalj@ijs.si</a>)</span><span class="m_-4817224012458943547apple-converted-space">
</span><span class="m_-4817224012458943547s1">*|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|*</span><span class="m_-4817224012458943547apple-converted-space"> </span>
<span class="m_-4817224012458943547s1">Jozef Stefan Institute, Ljubljana, Slovenia</span><span class="m_-4817224012458943547apple-converted-space">
</span><span class="m_-4817224012458943547s1">*|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|* </span><span class="m_-4817224012458943547apple-converted-space">
</span><span class="m_-4817224012458943547s1">*|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|*</span><span class="m_-4817224012458943547apple-converted-space"> </span>
<span class="m_-4817224012458943547s1">Copyright (c) 1996--2019 by Anton Kokalj </span><span class="m_-4817224012458943547apple-converted-space">
</span><span class="m_-4817224012458943547s1">*|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|* </span><span class="m_-4817224012458943547apple-converted-space">
</span><span class="m_-4817224012458943547s1">*|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">|*****************************************************************|</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">+-----------------------------------------------------------------+</span><u></u><u></u></p>
<p class="m_-4817224012458943547p2"><u></u> <u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">Version: 1.6.2</span><u></u><u></u></p>
<p class="m_-4817224012458943547p2"><u></u> <u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">Please report bugs to:
<a href="mailto:tone.kokalj@ijs.si" target="_blank">tone.kokalj@ijs.si</a></span><u></u><u></u></p>
<p class="m_-4817224012458943547p2"><u></u> <u></u></p>
<p class="m_-4817224012458943547p2"><u></u> <u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">TERMS OF USE:</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">-------------</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">XCRYSDEN is released under the GNU General Public License.</span><u></u><u></u></p>
<p class="m_-4817224012458943547p2"><u></u> <u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">Whenever graphics generated by XCRYSDEN are used in scientific</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">publications, it shall be greatly appreciated to include an explicit</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">reference. The preferred form is the following:</span><u></u><u></u></p>
<p class="m_-4817224012458943547p2"><u></u> <u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">[ref] A. Kokalj, J. Mol. Graph. Model., Vol. 17, pp. 176-179, 1999.</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">Code available from
<a href="http://www.xcrysden.org/" target="_blank">http://www.xcrysden.org/</a>.</span><u></u><u></u></p>
<p class="MsoNormal"><span style="font-size:11pt"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt"><u></u> <u></u></span></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">XCRYSDEN_TOPDIR=/opt/local/share/xcrysden-1.6.2</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">XCRYSDEN_SCRATCH=/var/folders/d6/987tghwd307_6djp3bhs765c0000gp/T/</span><u></u><u></u></p>
<p class="m_-4817224012458943547p2"><u></u> <u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Running on platform : unix</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547apple-converted-space"> </span><span class="m_-4817224012458943547s1">Operating system : Darwin</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Package ImageMagick's convert: /opt/local/bin/convert</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Package ImageMagick's import: /opt/local/bin/import</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Package Gifsicle: /opt/local/bin/gifsicle</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Package Whirlgif: /opt/local/bin/whirlgif</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Package Mencoder: /opt/local/bin/mencoder</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Package Ppmtompeg: /opt/local/bin/ppmtompeg</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Package Xwd: /opt/X11/bin/xwd</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Executing: /opt/local/lib/xcrysden-1.6.2/ftnunit</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Viewer: mesaWid = .mesa</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Executing: /opt/local/lib/xcrysden-1.6.2/str2xcr TiC</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .menu</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .mesa</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .ctrl</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .mea</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .close</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .#BWidget</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .__tk_filedialog</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Executing: /opt/local/lib/xcrysden-1.6.2/gengeom 0 1 21 1 1 1 1 /var/folders/d6/987tghwd307_6djp3bhs765c0000gp/T//xc_95436/xc_gengeom.95436 /var/folders/d6/987tghwd307_6djp3bhs765c0000gp/T//xc_95436/xc_str2xcr.95436</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .menu</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .mesa</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .ctrl</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .mea</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .close</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .#BWidget</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .__tk_filedialog</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Executing: /opt/local/lib/xcrysden-1.6.2/gengeom 2 1 21 5 1 1 1 /var/folders/d6/987tghwd307_6djp3bhs765c0000gp/T//xc_95436/xc_struc.95436 /var/folders/d6/987tghwd307_6djp3bhs765c0000gp/T//xc_95436/xc_str2xcr.95436</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .menu</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .mesa</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .ctrl</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .mea</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .close</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .#BWidget</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">SetWatchCursor: .__tk_filedialog</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">reading PRIMCOORD</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">reading CONVCOORD</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Number of Atoms:</span><span class="m_-4817224012458943547apple-converted-space">
</span><span class="m_-4817224012458943547s1">27</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Number of Frames: 12</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">natoms: 27 , ndel: 0</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Filtered number of atoms: 27</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">Estimated number of bonds = 108</span><u></u><u></u></p>
<p class="m_-4817224012458943547p1"><span class="m_-4817224012458943547s1">sInfo(dim) = 3; periodic(dim) = 3</span><u></u><u></u></p>
<p class="MsoNormal"><span style="font-size:11pt"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt"><u></u> <u></u></span></p>
<p class="MsoNormal"><u></u> <u></u></p>
</div>
</div>
</div></blockquote></div>