[64669] trunk/dports/science

[adfernandes at macports.org]

Revision: 64669
          http://trac.macports.org/changeset/64669
Author:   adfernandes at macports.org
Date:     2010-03-13 10:55:01 -0800 (Sat, 13 Mar 2010)
Log Message:
-----------
new port: science/ggobi; ticket #24041; a visualization sytem for high-dimensional data

Added Paths:
-----------
    trunk/dports/science/ggobi/
    trunk/dports/science/ggobi/Portfile
    trunk/dports/science/ggobi/files/
    trunk/dports/science/ggobi/files/patch-plugins-GraphLayout-graphviz.patch
    trunk/dports/science/ggobi/files/patch-src-barchart.diff
    trunk/dports/science/ggobi/files/patch-src-texture.diff

Added: trunk/dports/science/ggobi/Portfile
===================================================================
--- trunk/dports/science/ggobi/Portfile	                        (rev 0)
+++ trunk/dports/science/ggobi/Portfile	2010-03-13 18:55:01 UTC (rev 64669)
@@ -0,0 +1,35 @@
+# $Id$
+
+PortSystem 1.0
+
+name                ggobi
+version             2.1.8
+categories          science
+maintainers         adfernandes openmaintainer
+
+description         An open source visualization program \
+                    for exploring high-dimensional data.
+
+long_description    GGobi is an open source visualization program for exploring \
+                    high-dimensional data. It provides highly dynamic and interactive \
+                    graphics such as tours, as well as familiar graphics such as the \
+                    scatterplot, barchart and parallel coordinates plots. Plots are \
+                    interactive and linked with brushing and identification.
+
+platforms           darwin
+
+homepage            http://www.ggobi.org/
+master_sites        http://www.ggobi.org/downloads/
+checksums           sha1 62946881137b9262141961464bfe3c0090cc5b32
+use_bzip2           yes
+
+depends_lib         port:gtk2 port:libxml2 port:gob2 port:graphviz
+
+configure.args      --with-all-plugins
+
+patchfiles          patch-src-texture.diff patch-src-barchart.diff \
+                    patch-plugins-GraphLayout-graphviz.patch
+
+livecheck.type      regex
+livecheck.url       ${master_sites}
+livecheck.regex     "<strong>(\\d\\.\\d\\.\\d)</strong>"


Property changes on: trunk/dports/science/ggobi/Portfile
___________________________________________________________________
Added: svn:keywords
   + Id
Added: svn:eol-style
   + native

Added: trunk/dports/science/ggobi/files/patch-plugins-GraphLayout-graphviz.patch
===================================================================
--- trunk/dports/science/ggobi/files/patch-plugins-GraphLayout-graphviz.patch	                        (rev 0)
+++ trunk/dports/science/ggobi/files/patch-plugins-GraphLayout-graphviz.patch	2010-03-13 18:55:01 UTC (rev 64669)
@@ -0,0 +1,13 @@
+--- plugins/GraphLayout/graphviz.c	2009-03-15 15:03:18.000000000 -0400
++++ plugins/GraphLayout/graphviz.c	2009-03-15 15:04:30.000000000 -0400
+@@ -267,8 +267,8 @@
+       m = visible[i];
+       name = (gchar *) g_array_index (d->rowlab, gchar *, m);
+       node = agfindnode (graph, name);
+-      pos[i][0] = (gdouble) ND_coord_i(node).x;
+-      pos[i][1] = (gdouble) ND_coord_i(node).y;
++      pos[i][0] = (gdouble) ND_coord(node).x;
++      pos[i][1] = (gdouble) ND_coord(node).y;
+     }
+ 
+   } else if (layout_type == TWOPI_LAYOUT) {

Added: trunk/dports/science/ggobi/files/patch-src-barchart.diff
===================================================================
--- trunk/dports/science/ggobi/files/patch-src-barchart.diff	                        (rev 0)
+++ trunk/dports/science/ggobi/files/patch-src-barchart.diff	2010-03-13 18:55:01 UTC (rev 64669)
@@ -0,0 +1,12 @@
+--- src/barchart.c	2008-08-11 10:16:06.000000000 -0400
++++ src/barchart.c	2010-03-11 15:33:59.000000000 -0500
+@@ -1321,7 +1321,7 @@
+   indx = (gint *) g_malloc (ny * sizeof (gint));
+ 
+ /*
+- * gy is needed solely for the psort routine:  psort is used by
++ * gy is needed solely for the p_sort routine:  p_sort is used by
+  * qsort to put an index vector in the order that yy will assume.
+ */
+   gg->p1d.gy = (gfloat *) g_malloc (ny * sizeof (gfloat));
+diff -uNr ggobi-2.1.8.orig/src/texture.c ggobi-2.1.8/src/texture.c

Added: trunk/dports/science/ggobi/files/patch-src-texture.diff
===================================================================
--- trunk/dports/science/ggobi/files/patch-src-texture.diff	                        (rev 0)
+++ trunk/dports/science/ggobi/files/patch-src-texture.diff	2010-03-13 18:55:01 UTC (rev 64669)
@@ -0,0 +1,37 @@
+--- src/texture.c	2008-02-13 08:49:51.000000000 -0500
++++ src/texture.c	2010-03-11 15:34:17.000000000 -0500
+@@ -39,14 +39,14 @@
+ 
+ /* 
+  This variable is used as a temporary global value which
+- is used to communicate with qsort and psort since we have no
++ is used to communicate with qsort and p_sort since we have no
+  provision from textur to pass additional arguments.
+ 
+  In a multi-threaded version, we would need to protect this.
+ */
+ static ggobid *CurrentGGobi;
+ gint
+-psort (const void *arg1, const void *arg2)
++p_sort (const void *arg1, const void *arg2)
+ {
+   ggobid *gg = CurrentGGobi;
+ 
+@@ -195,7 +195,7 @@
+ 
+   indx = (gint *) g_malloc (ny * sizeof (gint));
+ /*
+- * gy is needed solely for the psort routine:  psort is used by
++ * gy is needed solely for the p_sort routine:  p_sort is used by
+  * qsort to put an index vector in the order that yy will assume.
+ */
+   gg->p1d.gy = (gfloat *) g_malloc (ny * sizeof (gfloat));
+@@ -208,7 +208,7 @@
+ 
+   CurrentGGobi = gg;
+ 
+-  qsort ((void *) indx, (gsize) ny, sizeof (gint), psort);
++  qsort ((void *) indx, (gsize) ny, sizeof (gint), p_sort);
+   qsort ((void *) yy, (gsize) ny, sizeof (gfloat), fcompare);
+   CurrentGGobi = NULL;
+ /*
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