[72419] trunk/dports/science

[ryandesign at macports.org]

Revision: 72419
          http://trac.macports.org/changeset/72419
Author:   ryandesign at macports.org
Date:     2010-10-14 01:17:54 -0700 (Thu, 14 Oct 2010)
Log Message:
-----------
samtools: new port, version 0.1.8; see #26843

Added Paths:
-----------
    trunk/dports/science/samtools/
    trunk/dports/science/samtools/Portfile

Added: trunk/dports/science/samtools/Portfile
===================================================================
--- trunk/dports/science/samtools/Portfile	                        (rev 0)
+++ trunk/dports/science/samtools/Portfile	2010-10-14 08:17:54 UTC (rev 72419)
@@ -0,0 +1,42 @@
+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
+# $Id$
+
+PortSystem              1.0
+
+name                    samtools
+version                 0.1.8
+categories              science
+platforms               darwin
+maintainers             gmail.com:haroldpimentel
+license                 MIT
+
+description             Tools for alignments in the SAM format
+
+long_description        SAM (Sequence Alignment/Map) Tools provide various \
+                        utilities for manipulating alignments in the SAM \
+                        format, including sorting, merging, indexing and \
+                        generating alignments in a per-position format.
+
+homepage                http://samtools.sourceforge.net/
+master_sites            sourceforge
+
+checksums               sha1    eb97190db34a9c380fdfa7501af9fc3930a5debc \
+                        rmd160  0833fa1819485409fd929307248a5b0483827c08
+
+use_bzip2               yes
+
+depends_lib             port:zlib
+
+use_configure           no
+
+destroot {
+    xinstall -m 755 ${worksrcpath}/samtools ${destroot}${prefix}/bin
+    xinstall -m 644 ${worksrcpath}/libbam.a ${destroot}${prefix}/lib
+    xinstall -d ${destroot}${prefix}/include/bam
+    eval xinstall -m 644 [glob ${worksrcpath}/*.h] ${destroot}${prefix}/include/bam
+    
+    xinstall -d ${destroot}${prefix}/share/doc/${name}
+    xinstall -m 644 -W ${worksrcpath} \
+        AUTHORS COPYING ChangeLog NEWS \
+        ${destroot}${prefix}/share/doc/${name}
+}


Property changes on: trunk/dports/science/samtools/Portfile
___________________________________________________________________
Added: svn:keywords
   + Id
Added: svn:eol-style
   + native
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