[84194] trunk/dports/science

[jmr at macports.org]

Revision: 84194
          http://trac.macports.org/changeset/84194
Author:   jmr at macports.org
Date:     2011-09-20 01:38:44 -0700 (Tue, 20 Sep 2011)
Log Message:
-----------
New port: nMOLDYN, an interactive analysis program for Molecular Dynamics simulations. (#26994)

Added Paths:
-----------
    trunk/dports/science/nMOLDYN/
    trunk/dports/science/nMOLDYN/Portfile
    trunk/dports/science/nMOLDYN/files/
    trunk/dports/science/nMOLDYN/files/setup.py.patch

Added: trunk/dports/science/nMOLDYN/Portfile
===================================================================
--- trunk/dports/science/nMOLDYN/Portfile	                        (rev 0)
+++ trunk/dports/science/nMOLDYN/Portfile	2011-09-20 08:38:44 UTC (rev 84194)
@@ -0,0 +1,34 @@
+# $Id$
+
+PortSystem 1.0
+PortGroup python26 1.0
+
+name                nMOLDYN
+version             3.0.9
+categories          science
+maintainers         fastmail.net:konrad.hinsen openmaintainer
+description         An interactive analysis program for Molecular Dynamics simulations.
+long_description    $description
+homepage            http://dirac.cnrs-orleans.fr/nMOLDYN/
+platforms           darwin
+
+master_sites        https://forge.epn-campus.eu/attachments/download/1160/
+checksums           md5     2d854468c7dfb8e1cb7250bae93b5d7a \
+                    sha1    d06f24ab3af9d3b7da39f46b42c50d1dfa72a519 \
+                    rmd160  152b13853026d93b7080e30e812abf7f92e7f2ef
+
+use_zip             yes
+
+patchfiles          setup.py.patch
+
+depends_build       port:py26-distribute
+depends_lib         port:py26-tkinter \
+                    port:py26-MMTK \
+                    port:py26-pyro \
+                    port:py26-matplotlib
+
+build.env           CPPFLAGS="-I${prefix}/include -I${python.include}"
+
+python.link_binaries_suffix
+
+livecheck.type      none


Property changes on: trunk/dports/science/nMOLDYN/Portfile
___________________________________________________________________
Added: svn:keywords
   + Id
Added: svn:eol-style
   + native

Added: trunk/dports/science/nMOLDYN/files/setup.py.patch
===================================================================
--- trunk/dports/science/nMOLDYN/files/setup.py.patch	                        (rev 0)
+++ trunk/dports/science/nMOLDYN/files/setup.py.patch	2011-09-20 08:38:44 UTC (rev 84194)
@@ -0,0 +1,57 @@
+--- setup.py.orig	2011-02-28 17:31:32.000000000 +1100
++++ setup.py	2011-09-20 18:31:39.000000000 +1000
+@@ -52,9 +52,9 @@
+     raise SystemExit
+ 
+ # Check that we have the minimal numpy version.
++numpy_minversion = LooseVersion(vstring = "1.1.0")
+ try:
+     import numpy
+-    numpy_minversion = LooseVersion(vstring = "1.1.0")
+     numpy_version = LooseVersion(vstring = numpy.__version__)
+     
+     if cmpver(numpy_version, numpy_minversion, pad = 0) == -1: raise
+@@ -64,9 +64,9 @@
+     raise SystemExit
+ 
+ # Check that we have the minimal matplotlib version.
++matplotlib_minversion = LooseVersion(vstring = '0.98.0')
+ try:
+     from matplotlib import __version__ as matplotlib_version
+-    matplotlib_minversion = LooseVersion(vstring = '0.98.0')
+     matplotlib_version = LooseVersion(vstring = matplotlib_version)
+     
+     if cmpver(matplotlib_version, matplotlib_minversion, pad = 0) == -1: raise 
+@@ -75,9 +75,9 @@
+     print 'nMOLDYN needs matplotlib %s or higher. The plotting functionnalities will be disabled.' % matplotlib_minversion
+ 
+ # Check that we have the minimal PyRO version.
++pyro_minversion = LooseVersion(vstring = '3.9.0')
+ try:
+     from Pyro.constants import VERSION as pyro_version
+-    pyro_minversion = LooseVersion(vstring = '3.9.0')
+     pyro_version = LooseVersion(vstring = pyro_version)
+     
+     if cmpver(pyro_version, pyro_minversion, pad = 0) == -1: raise 
+@@ -86,9 +86,9 @@
+     print 'nMOLDYN needs pyro %s or higher. The parallel computing functionnalities will be disabled.' % pyro_minversion
+ 
+ # Check that we have the minimal Scientific version.
++scientific_minversion = LooseVersion(vstring = '2.8.0')
+ try:
+     from Scientific import __version__ as scientific_version
+-    scientific_minversion = LooseVersion(vstring = '2.8.0')
+     scientific_version = LooseVersion(vstring = scientific_version)
+     
+     if cmpver(scientific_version, scientific_minversion, pad = 0) == -1: raise 
+@@ -98,9 +98,9 @@
+     raise SystemExit
+ 
+ # Check that we have the minimal MMTK version.
++mmtk_minversion = LooseVersion(vstring = '2.6.1')
+ try:
+     from MMTK import __version__ as mmtk_version
+-    mmtk_minversion = LooseVersion(vstring = '2.6.1')
+     mmtk_version = LooseVersion(vstring = mmtk_version)
+     
+     if cmpver(mmtk_version, mmtk_minversion, pad = 0) == -1: raise 
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