[91988] trunk/dports/science

ryandesign at macports.org ryandesign at macports.org
Sat Apr 14 22:30:38 PDT 2012


Revision: 91988
          https://trac.macports.org/changeset/91988
Author:   ryandesign at macports.org
Date:     2012-04-14 22:30:35 -0700 (Sat, 14 Apr 2012)
Log Message:
-----------
rNMR: new port, version 1.1.7; see #34049

Added Paths:
-----------
    trunk/dports/science/rNMR/
    trunk/dports/science/rNMR/Portfile
    trunk/dports/science/rNMR/files/
    trunk/dports/science/rNMR/files/rNMR.sh

Added: trunk/dports/science/rNMR/Portfile
===================================================================
--- trunk/dports/science/rNMR/Portfile	                        (rev 0)
+++ trunk/dports/science/rNMR/Portfile	2012-04-15 05:30:35 UTC (rev 91988)
@@ -0,0 +1,57 @@
+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
+# $Id$
+
+PortSystem          1.0
+
+name                rNMR
+version             1.1.7
+categories          science
+platforms           darwin
+maintainers         bromo.med.uc.edu:howarth
+supported_archs     noarch
+license             GPL-3
+
+description         Open Source Software for NMR Data Analysis
+
+long_description    rNMR is an open source software package for visualizing \
+                    and interpreting one and two dimensional NMR data. In \
+                    contrast to most existing 2D NMR software, rNMR is \
+                    specifically designed for high-throughput assignment and \
+                    quantification of small molecules. As a result, rNMR \
+                    supports extensive batch manipulation of plotting \
+                    parameters and has numerous tools for expediting \
+                    repetitive resonance assignment and quantification tasks.
+
+homepage            http://rnmr.nmrfam.wisc.edu/
+master_sites        ${homepage}pages/download/files/Binaries/Mac%20and%20Linux/current/ \
+                    ${homepage}pages/download/files/Binaries/Mac%20and%20Linux/${version}/
+
+distname            ${name}_${version}
+
+checksums           rmd160  daaa56141cb1fdd5febd33601147f6ef401ed837 \
+                    sha256  fb9082bb098af1678c5e9b566e6f3411ee46256d47488f5dd2f1f367b3513c1f
+
+depends_lib         port:R
+
+use_configure       no
+
+build {
+    file mkdir ${worksrcpath}/pkg
+    system -W ${worksrcpath} "${prefix}/bin/R CMD INSTALL -l pkg --byte-compile --build ${distpath}/[lindex ${distfiles} 0]"
+}
+
+destroot {
+    xinstall -d ${destroot}${prefix}/lib/R/library/${name}/macosx/
+    system "tar -C ${destroot}${prefix}/lib/R/library -zxf ${worksrcpath}/${distname}.tgz"
+    xinstall -W ${destroot}${prefix}/lib/R/library/${name}/linux \
+        loadrNMR.R rNMR.gif xdg-open \
+        ${destroot}${prefix}/lib/R/library/${name}/macosx/
+    reinplace "s|~/rNMR/linux/|./|g" ${destroot}${prefix}/lib/R/library/${name}/macosx/loadrNMR.R
+    xinstall -m 755 ${filespath}/${name}.sh ${destroot}${prefix}/lib/R/library/${name}/macosx
+    reinplace "s|@PREFIX@|${prefix}|g" ${destroot}${prefix}/lib/R/library/${name}/macosx/rNMR.sh
+    ln -s ${prefix}/lib/R/library/${name}/macosx/${name}.sh ${destroot}${prefix}/bin/${name}
+}
+
+livecheck.type      regex
+livecheck.url       [lindex ${master_sites} 0]
+livecheck.regex     ${name}_(\[0-9.\]+)${extract.suffix}


Property changes on: trunk/dports/science/rNMR/Portfile
___________________________________________________________________
Added: svn:keywords
   + Id
Added: svn:eol-style
   + native

Added: trunk/dports/science/rNMR/files/rNMR.sh
===================================================================
--- trunk/dports/science/rNMR/files/rNMR.sh	                        (rev 0)
+++ trunk/dports/science/rNMR/files/rNMR.sh	2012-04-15 05:30:35 UTC (rev 91988)
@@ -0,0 +1,4 @@
+#!/bin/sh
+rm -f .RData
+ at PREFIX@/bin/R -f @PREFIX@/lib/R/library/rNMR/macosx/loadrNMR.R
+ at PREFIX@/bin/R


Property changes on: trunk/dports/science/rNMR/files/rNMR.sh
___________________________________________________________________
Added: svn:executable
   + *
Added: svn:eol-style
   + native
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