[122619] trunk/dports/math/atlas

vince at macports.org vince at macports.org
Thu Jul 24 23:05:14 PDT 2014


Revision: 122619
          https://trac.macports.org/changeset/122619
Author:   vince at macports.org
Date:     2014-07-24 23:05:14 -0700 (Thu, 24 Jul 2014)
Log Message:
-----------
Bump to latest stable. Remove the clang33 option that hangs with some kind of CPU (Corei7) and makes Apple clang the default.

Modified Paths:
--------------
    trunk/dports/math/atlas/Portfile

Added Paths:
-----------
    trunk/dports/math/atlas/files/patch-archinfo_x86_c.diff

Removed Paths:
-------------
    trunk/dports/math/atlas/files/patch-ATL_cmm4x4x128_av_c.diff
    trunk/dports/math/atlas/files/patch-emit_mm_c.diff
    trunk/dports/math/atlas/files/patch-makes-Make.lib.diff

Modified: trunk/dports/math/atlas/Portfile
===================================================================
--- trunk/dports/math/atlas/Portfile	2014-07-24 23:31:36 UTC (rev 122618)
+++ trunk/dports/math/atlas/Portfile	2014-07-25 06:05:14 UTC (rev 122619)
@@ -1,4 +1,5 @@
 # $Id$
+set                     ports_ignore_different "yes"
 
 PortSystem              1.0
 PortGroup               muniversal 1.0
@@ -6,12 +7,11 @@
 categories              math
 license                 BSD
 name                    atlas
-version                 3.10.1
-revision                5
+version                 3.10.2
 use_bzip2               yes
 
 # additional versions
-set lapackversion       3.4.2
+set lapackversion       3.5.0
 set lapackname          lapack
 set atlasdist           ${name}${version}${extract.suffix}
 set lapackdist          ${lapackname}-${lapackversion}.tgz
@@ -29,7 +29,7 @@
 
 homepage                http://math-atlas.sourceforge.net/
 
-master_sites            sourceforge:project/math-atlas/Stable/${version}:atlas \
+master_sites            sourceforge:http://downloads.sourceforge.net/project/math-atlas/Stable/${version} \
                         http://www.netlib.org/lapack:lapack
 
 distfiles               ${atlasdist}:atlas \
@@ -37,26 +37,37 @@
 
 extract.only            ${atlasdist}
 
-patchfiles              patch-emit_mm_c.diff \
-                        patch-ATL_cmm4x4x128_av_c.diff \
-                        patch-makes-Make.lib.diff
+patchfiles              patch-archinfo_x86_c.diff 
 
-checksums               ${atlasdist} \
-                        rmd160  67f928ad900caa300b23e2f824b8a495f416c8d6 \
-                        sha256  a215b492204aae0205f4028e7c4076492a5d6a564f8f859ff062fd79587bcc86 \
-                        ${lapackdist} \
-                        rmd160  8740c35c9a85b71424fe1ffeed192256aebeb431 \
-                        sha256  60a65daaf16ec315034675942618a2230521ea7adf85eea788ee54841072faf0
+checksums           atlas3.10.2.tar.bz2 \
+                    rmd160  af4099e8bb65f5d771618ca1580f5bc8210f83fe \
+                    sha256  3aab139b118bf3fcdb4956fbd71676158d713ab0d3bccb2ae1dc3769db22102f \
+                    lapack-3.5.0.tgz \
+                    rmd160  d803308ef28f3c6cffb051850823395e2cb29b6a \
+                    sha256  9ad8f0d3f3fb5521db49f2dd716463b8fb2b6bc9dc386a9956b8c6144f726352
 
 worksrcdir              ATLAS
 
-compiler.blacklist      macports-clang-3.1 macports-clang-3.0 \
-                        macports-clang-2.9
+compiler.blacklist      macports-clang-3.2 macports-clang-3.1  \
+                        macports-clang-3.0 macports-clang-2.9
 
 set     gcc_version      0
 set     use_clang        ""
 
-variant gcc48            conflicts   gcc46 gcc47 clang mpclang33 perf \
+variant gcc49           conflicts   gcc47 gcc48 clang mpclang34 perf\
+                        description {build using macports-gcc-4.9} {
+
+    configure.compiler      macports-gcc-4.9
+}
+
+if {[variant_isset gcc49]} {
+
+    set gcc_version         49
+    set use_clang           ""
+
+}
+
+variant gcc48            conflicts   gcc47 gcc49 clang mpclang34 perf \
                          description {build using macports-gcc-4.8} {
 
     configure.compiler      macports-gcc-4.8
@@ -68,7 +79,7 @@
     set use_clang           ""
 }
 
-variant gcc47           conflicts   gcc46 gcc48 clang mpclang33 perf \
+variant gcc47           conflicts   gcc48 gcc49 clang mpclang34 perf \
                         description {build using macports-gcc-4.7} {
 
     configure.compiler      macports-gcc-4.7
@@ -80,20 +91,8 @@
     set use_clang           ""
 }
 
-variant gcc46           conflicts   gcc47 gcc48 clang mpclang33 perf\
-                        description {build using macports-gcc-4.6} {
 
-    configure.compiler      macports-gcc-4.6
-}
-
-if {[variant_isset gcc46]} {
-
-    set gcc_version         46
-    set use_clang           ""
-
-}
-
-variant clang           conflicts   gcc46 gcc47 gcc48 mpclang33 \
+variant clang           conflicts   gcc47 gcc48 gcc49 mpclang34 \
                         description {use XCode clang and gfortran} {
 
     pre-fetch {
@@ -112,33 +111,39 @@
     set gcc_version         0
 }
 
-variant mpclang33       conflicts   gcc46 gcc47 gcc48 clang perf\
-                        description {use mp-clang-3.3 and gfortran} { 
+variant mpclang34       conflicts   gcc47 gcc48 gcc49 clang perf\
+                        description {use mp-clang-3.4 and gfortran} { 
 
-    configure.compiler      macports-clang-3.3
+    configure.compiler      macports-clang-3.4
 }
 
-if {[variant_isset mpclang33]} {
+if {[variant_isset mpclang34]} {
 
-    set use_clang           "33"
+    set use_clang           "34"
     set gcc_version         0
 }
 
-variant perf conflicts gcc46 gcc47 gcc48 mpclang33 clang \
-             description {Uses clang-mp-3.3 for C and dragonegg-3.3 for Fortran} {
+variant perf conflicts gcc47 gcc48 gcc49 mpclang34 clang \
+             description {Uses clang-mp-3.4 for C and dragonegg-3.4 for Fortran} {
 
-    configure.compiler      macports-clang-3.3
-    depends_build-append    port:dragonegg-3.3-gcc-4.8
-    configure.f77           ${prefix}/bin/dragonegg-3.3-gfortran-mp-4.8
+    if {[vercmp ${xcodeversion} 5.0] < 0} {
+        configure.compiler      macports-clang-3.4
+    } else {
+        set use_clang           "XCode"
+        set gcc_version         0
+    }
 
+    depends_build-append    port:dragonegg-3.4-gcc-4.8
+    configure.f77           ${prefix}/bin/dragonegg-3.4-gfortran-mp-4.8
+
     set clang_flags         "-O3 -fPIC -fomit-frame-pointer" 
     set gcc_flags           "${clang_flags} \
-                            -specs=${prefix}/libexec/dragonegg/llvm33gcc48-integrated-as.specs"
+                            -specs=${prefix}/libexec/dragonegg/llvm34gcc48-integrated-as.specs"
 }
 
 if {[variant_isset perf]} {
 
-    set use_clang           "33"
+    set use_clang           "34"
     set gcc_version         48
 }
 
@@ -178,11 +183,11 @@
 }
 
 # If none of the above variants is chosen, make gcc47 the default for
-# up to SSE4.2 (Core i1) capable processors, and mp-clang-3.3 for newer
+# up to SSE4.2 (Core i1) capable processors, and XCode-clang for newer
 
-if {![variant_isset gcc46] && ![variant_isset gcc47] && \
-    ![variant_isset gcc48] && ![variant_isset clang] && \
-    ![variant_isset perf] && ![variant_isset mpclang33]} {
+if {![variant_isset gcc47] && ![variant_isset gcc48] && \
+    ![variant_isset gcc49] && ![variant_isset clang] && \
+    ![variant_isset perf] && ![variant_isset mpclang34]} {
 
     if {${has_avx} == "no"} {
     
@@ -191,11 +196,18 @@
         set gcc_version     47
         set use_clang       ""
     } else {
-    
-        # Defaults to clang-mp-3.3
-        default_variants    +mpclang33
-        set gcc_version     0
-        set use_clang       "33"
+
+        # Use an appropriate version of Clang
+        set gcc_version     0    
+        if {[vercmp ${xcodeversion} 5.0] >= 0} {
+        # With XCode 5.0+, defaults to Xcode-clang
+            default_variants    +clang
+            set use_clang       "XCode"
+        } else {
+            # Otherwise use Macports clang 3.4
+            default_variants    +mpclang34
+            set use_clang       "34"
+        }
     }
 }
 
@@ -245,10 +257,10 @@
         # Only Clang handles AVX+ correctly
         set gvct_flag   "-msse4.2"
         # downgrade FMA to AVX for the time being
-        set cvct_flag   "-mavx"
+        set cvct_flag   "-mfma"
         if {${use_clang} != ""} {
 
-            configure.args-append   -A 26 -V 480
+            configure.args-append   -A 28 -V 456
         } else {
 
             # No AVX when using GCC 4.x
@@ -425,6 +437,8 @@
                 set gcc_version   \
                 [join [split [string range ${configure.f77} end-2 end] "."] ""]            
             }
+        } else {
+            set libgccpath                  ${prefix}/lib/gcc48
         }
     }
 
@@ -432,7 +446,7 @@
 
         # Output the F77 selected compiler
         if {[variant_isset perf]} {
-            ui_msg "Using dragonegg-3.3-gfortran-mp-4.8 as Fortran compiler."
+            ui_msg "Using dragonegg-3.4-gfortran-mp-4.8 as Fortran compiler."
         } else {
             ui_msg "Selected F77 compiler: gfortran${gcc_version}"
         }
@@ -478,7 +492,7 @@
         
         # AVX stuff. GCC compilers cannot use AVX instruction set because the
         # system as(1) is outdated
-        # Clang 3.3 is fine
+        # Clang 3.4 is fine
 
         if {${has_avx} == "yes" && ${use_clang} == ""} {
 
@@ -760,40 +774,40 @@
 build.target            build
 build.dir               ${worksrcpath}/build
 
-post-build {
-    if {${universal} == 0} {
+#post-build {
+#    if {${universal} == 0} {
+#
+#        set libdir ${build.dir}/lib
+#        reinplace "s|^LIBTOOL=.*$|LIBTOOL=\$\(GCC\) \$\(GCCFLAGS\)|" \
+#            ${libdir}/Makefile
 
-        set libdir ${build.dir}/lib
-        reinplace "s|^LIBTOOL=.*$|LIBTOOL=\$\(GCC\) \$\(GCCFLAGS\)|" \
-            ${libdir}/Makefile
-
         # On mono-processors machines, build libsatlas.dylib only
-        if {${no_threads} == 1} {
+#        if {${no_threads} == 1} {
+#
+#            system -W ${libdir} "${build.cmd} dylib"
+#        } else {
+#
+#            system -W ${libdir} "${build.cmd} shared_all"
+#        }
+#    } else {
+#
+#        foreach arch ${universal_archs_to_use} {
 
-            system -W ${libdir} "${build.cmd} dylib"
-        } else {
+#            set libdir ${worksrcpath}-${arch}/build/lib
+#            reinplace "s|^LIBTOOL=.*$|LIBTOOL=\$\(GCC\) \$\(GCCFLAGS\)|" \
+#                ${libdir}/Makefile
 
-            system -W ${libdir} "${build.cmd} shared_all"
-        }
-    } else {
-
-        foreach arch ${universal_archs_to_use} {
-
-            set libdir ${worksrcpath}-${arch}/build/lib
-            reinplace "s|^LIBTOOL=.*$|LIBTOOL=\$\(GCC\) \$\(GCCFLAGS\)|" \
-                ${libdir}/Makefile
-
             # Same as above
-            if {${no_threads} == 1} {
+#           if {${no_threads} == 1} {
 
-                system -W ${libdir} "${build.cmd} dylib"
-            } else {
+#                system -W ${libdir} "${build.cmd} dylib"
+#            } else {
 
-                system -W ${libdir} "${build.cmd} shared_all"
-            }
-        }
-    }
-}
+#                system -W ${libdir} "${build.cmd} shared_all"
+#            }
+#        }
+#    }
+#}
 
 destroot.dir          ${build.dir}
 destroot.destdir      DESTDIR=${destroot}${prefix}

Deleted: trunk/dports/math/atlas/files/patch-ATL_cmm4x4x128_av_c.diff
===================================================================
--- trunk/dports/math/atlas/files/patch-ATL_cmm4x4x128_av_c.diff	2014-07-24 23:31:36 UTC (rev 122618)
+++ trunk/dports/math/atlas/files/patch-ATL_cmm4x4x128_av_c.diff	2014-07-25 06:05:14 UTC (rev 122619)
@@ -1,11 +0,0 @@
---- tune/blas/gemm/CASES/ATL_cmm4x4x128_av.c.orig	2012-12-14 12:32:46.000000000 +0100
-+++ tune/blas/gemm/CASES/ATL_cmm4x4x128_av.c	2012-12-14 12:32:55.000000000 +0100
-@@ -1321,7 +1321,7 @@
-    #endif
- 	vmaddfp	vC01, vA0, vB1, vC01
-    #ifdef BETAX
--	dcbtst	0, pBETA, 0
-+	dcbtst	0, pBETA
-    #endif
- 	vmaddfp	vC11, vA1, vB1, vC11
- 	vmaddfp	vC21, vA2, vB1, vC21

Added: trunk/dports/math/atlas/files/patch-archinfo_x86_c.diff
===================================================================
--- trunk/dports/math/atlas/files/patch-archinfo_x86_c.diff	                        (rev 0)
+++ trunk/dports/math/atlas/files/patch-archinfo_x86_c.diff	2014-07-25 06:05:14 UTC (rev 122619)
@@ -0,0 +1,10 @@
+--- CONFIG/src/backend/archinfo_x86.c.old	2014-07-17 21:47:57.000000000 +0200
++++ CONFIG/src/backend/archinfo_x86.c	2014-07-17 21:48:42.000000000 +0200
+@@ -342,6 +342,7 @@
+          break;
+       case 0x2D:
+       case 0x3A:
++      case 0x3E:
+       case 0x2A:
+          iret = IntCorei2;
+ 	 break;

Deleted: trunk/dports/math/atlas/files/patch-emit_mm_c.diff
===================================================================
--- trunk/dports/math/atlas/files/patch-emit_mm_c.diff	2014-07-24 23:31:36 UTC (rev 122618)
+++ trunk/dports/math/atlas/files/patch-emit_mm_c.diff	2014-07-25 06:05:14 UTC (rev 122619)
@@ -1,15 +0,0 @@
---- tune/blas/gemm/emit_mm.c.orig	2012-12-10 13:59:14.000000000 +0100
-+++ tune/blas/gemm/emit_mm.c	2012-12-10 13:59:59.000000000 +0100
-@@ -2688,10 +2688,7 @@
-       {
-          if (wp->CC[0])  /* need non-default compilation rule */
-          {
--            char *comp = (wp->CC[0] == 'g' && wp->CC[1] == 'c'
--                          && wp->CC[2] == 'c' &&
--                          (wp->CC[3] == '\0' || wp->CC[3] == ' '))
--                         ? "$(GOODGCC)" : wp->CC;
-+            char *comp = "$(GOODGCC)";
-             for (j=0; j < nbetas; j++)
-             {
-                for(k=0; k < wp->ncomps; k++)
-

Deleted: trunk/dports/math/atlas/files/patch-makes-Make.lib.diff
===================================================================
--- trunk/dports/math/atlas/files/patch-makes-Make.lib.diff	2014-07-24 23:31:36 UTC (rev 122618)
+++ trunk/dports/math/atlas/files/patch-makes-Make.lib.diff	2014-07-25 06:05:14 UTC (rev 122619)
@@ -1,56 +0,0 @@
---- makes/Make.lib.orig	2013-01-08 12:15:41.000000000 -0600
-+++ makes/Make.lib	2013-11-24 02:11:17.000000000 -0600
-@@ -242,7 +242,7 @@
-                 LIBINSTdir="$(LIBINSTdir)"
- 
- #  =======================================================================
--#  The following commands are to build dynamib libraries on OS X (in BETA)
-+#  The following commands are to build dynamic libraries on OS X (in BETA)
- #  =======================================================================
- dylib :
- 	rm -rf $(tmpd) ; mkdir $(tmpd)
-@@ -250,7 +250,7 @@
- 	cd $(tmpd) ; ar x ../libf77blas.a
- 	cd $(tmpd) ; ar x ../libcblas.a 
- 	cd $(tmpd) ; ar x ../libatlas.a
--	cd $(tmpd) ; $(LIBTOOL) -dynamic -o ../libsatlas.dylib \
-+	cd $(tmpd) ; $(LIBTOOL) -dynamiclib -o ../libsatlas.dylib \
-         -install_name $(LIBINSTdir)/libsatlas.dylib -current_version $(VER) \
-         -compatibility_version $(VER) *.o $(LIBS) $(F77SYSLIB)
- 	rm -rf $(tmpd)
-@@ -260,7 +260,7 @@
- 	cd $(tmpd) ; ar x ../libptf77blas.a 
- 	cd $(tmpd) ; ar x ../libptcblas.a 
- 	cd $(tmpd) ; ar x ../libatlas.a
--	cd $(tmpd) ; $(LIBTOOL) -dynamic -o ../libtatlas.dylib \
-+	cd $(tmpd) ; $(LIBTOOL) -dynamiclib -o ../libtatlas.dylib \
-         -install_name $(LIBINSTdir)/libtatlas.dylib -current_version $(VER) \
-         -compatibility_version $(VER) *.o $(LIBS) $(F77SYSLIB)
- 	rm -rf $(tmpd)
-@@ -269,7 +269,7 @@
- 	cd $(tmpd) ; ar x ../libclapack.a 
- 	cd $(tmpd) ; ar x ../libcblas.a 
- 	cd $(tmpd) ; ar x ../libatlas.a
--	cd $(tmpd) ; $(LIBTOOL) -dynamic -o ../libsatlas.dylib \
-+	cd $(tmpd) ; $(LIBTOOL) -dynamiclib -o ../libsatlas.dylib \
-         -install_name $(LIBINSTdir)/libsatlas.dylib -current_version $(VER) \
-         -compatibility_version $(VER) *.o $(LIBS)
- 	rm -rf $(tmpd)
-@@ -278,7 +278,7 @@
- 	cd $(tmpd) ; ar x ../libptclapack.a
- 	cd $(tmpd) ; ar x ../libptcblas.a 
- 	cd $(tmpd) ; ar x ../libatlas.a
--	cd $(tmpd) ; $(LIBTOOL) -dynamic -o ../libtatlas.dylib \
-+	cd $(tmpd) ; $(LIBTOOL) -dynamiclib -o ../libtatlas.dylib \
-         -install_name $(LIBINSTdir)/libtatlas.dylib -current_version $(VER) \
-         -compatibility_version $(VER) *.o $(LIBS)
- 	rm -rf $(tmpd)
-@@ -287,7 +287,7 @@
- 	rm -rf $(tmpd) ; mkdir $(tmpd)
- 	cd $(tmpd) ; ar x ../liblapack.a
- 	rm -f $(tmpd)/*C2F $(tmpd)/*f77wrap*
--	cd $(tmpd) ; libtool -dynamic -o ../libclapack.dylib \
-+	cd $(tmpd) ; libtool -dynamiclib -o ../libclapack.dylib \
-            -install_name $(LIBINSTdir)/libclapack.dylib \
-            -compatibility_version $(VER) -current_version $(VER) \
-            *.o ../libcblas.dylib ../libatlas.dylib $(LIBS)
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