[133313] trunk/dports/math/octave-tsa
michaelld at macports.org
michaelld at macports.org
Wed Feb 25 06:57:42 PST 2015
Revision: 133313
https://trac.macports.org/changeset/133313
Author: michaelld at macports.org
Date: 2015-02-25 06:57:42 -0800 (Wed, 25 Feb 2015)
Log Message:
-----------
octave-tsa: update to 4.2.9; addresses ticket #46650.
Modified Paths:
--------------
trunk/dports/math/octave-tsa/Portfile
trunk/dports/math/octave-tsa/files/patch-src_Makefile.diff
Modified: trunk/dports/math/octave-tsa/Portfile
===================================================================
--- trunk/dports/math/octave-tsa/Portfile 2015-02-25 14:48:07 UTC (rev 133312)
+++ trunk/dports/math/octave-tsa/Portfile 2015-02-25 14:57:42 UTC (rev 133313)
@@ -4,7 +4,7 @@
PortSystem 1.0
PortGroup octave 1.0
-octave.setup tsa 4.2.7
+octave.setup tsa 4.2.9
platforms darwin
license GPL-3+
maintainers gmail.com:mschamschula openmaintainer
@@ -12,7 +12,9 @@
methods for time series analysis.
long_description ${description}
-checksums rmd160 f19d0439adadb9121e7deab9f01532d692a64d65 \
- sha256 48c22265ed0962c09ef7c1777628afc5d9a206089c674b7b9727a0c5a545b229
+checksums rmd160 b9293345970b866887a406113ff2e9b8708e3588 \
+ sha256 922f99ad49dc60a0888f5707f10aff1f43e52b47b6b444c90a3eb936cb1c4409
patchfiles patch-src_Makefile.diff
+
+configure.env-append "PREFIX_BIN=${prefix}/bin"
Modified: trunk/dports/math/octave-tsa/files/patch-src_Makefile.diff
===================================================================
--- trunk/dports/math/octave-tsa/files/patch-src_Makefile.diff 2015-02-25 14:48:07 UTC (rev 133312)
+++ trunk/dports/math/octave-tsa/files/patch-src_Makefile.diff 2015-02-25 14:57:42 UTC (rev 133313)
@@ -1,38 +1,134 @@
---- src/Makefile.orig 2014-01-12 14:29:06.000000000 -0600
-+++ src/Makefile 2014-11-28 13:18:52.000000000 -0600
-@@ -41,14 +41,19 @@
+--- src/Makefile.orig 2015-01-25 17:26:10.000000000 -0500
++++ src/Makefile 2015-01-25 17:30:51.000000000 -0500
+@@ -4,125 +4,21 @@
+ # http://pub.ist.ac.at/~schloegl/matlab/tsa/
+ ####################################################
-
-
+-### modify directories according to your needs
+-
+-# Define non-default octave-version
+-# Octave - global install (e.g. from debian package)
+-# OCTAVE_VERSION=
+-# Better alternative: define an OCTAVE_VERSION bash variable (or in .bashrc or .profile)
+-# OCTAVE_VERSION=-3.6.3
+-
+-# Matlab configuration
+-# MATLABDIR = /usr/local/MATLAB/R2010b
+-# comment the following line if you use MATLAB on 32-bit operating system
+-MEX_OPTION += -largeArrayDims
+-
+-# Mingw crosscompiler: available at http://www.nongnu.org/mingw-cross-env/
+-CROSS = $(HOME)/src/mxe/usr/bin/i686-w64-mingw32.static
+-CROSS64 = $(HOME)/src/mxe/usr/bin/x86_64-w64-mingw32.static
+-# include directory for Win32-Matlab include
+-W32MAT_INC = -I$(HOME)/bin/win32/Matlab/R2010b/extern/include/
+-W64MAT_INC = -I$(HOME)/bin/win64/Matlab/R2010b/extern/include/
+-# path to GNUMEX libraries, available from here http://sourceforge.net/projects/gnumex/
+-GNUMEX = $(HOME)/bin/win32/gnumex
+-GNUMEX64 = $(HOME)/bin/win64/gnumex
+-# building gnumex64 was difficult, these hints were quite useful:
+-# http://sourceforge.net/mailarchive/forum.php?thread_name=AANLkTinZvxgC9ezp2P3UCX_a7TAUYuVsp2U40MQUV6qr%40mail.gmail.com&forum_name=gnumex-users
+-# Instead of building "mex shortpath.c" and "mex uigetpath.c", I used empty m-functions within argout=argin;
+-####################################################
+-W32MAT_INC += -I$(subst /usr/bin/,/usr/,$(CROSS))/include/
+-W64MAT_INC += -I$(subst /usr/bin/,/usr/,$(CROSS64))/include/
+-LDLIBS_W32 = $(subst /usr/bin/,/usr/,$(CROSS))/lib/
+-LDLIBS_W64 = $(subst /usr/bin/,/usr/,$(CROSS64))/lib/
+-W32_LIBS = $(LDLIBS_W32)liblapack.a
+-W64_LIBS = $(LDLIBS_W64)liblapack.a
+-W32_LIBS += $(LDLIBS_W32)libblas.a
+-W64_LIBS += $(LDLIBS_W64)libblas.a
+-
-CC = gcc
-CXX = g++
-+#CC = gcc
-+#CXX = g++
- CFLAGS = -fopenmp -Wall -Wextra -Wconversion -O2 -fPIC
- OCTMEX = mkoctfile$(OCTAVE_VERSION) --mex
+-CFLAGS = -Wall -Wextra -Wconversion -O2 -fPIC
+-OCTMEX = mkoctfile$(OCTAVE_VERSION) --mex
++CFLAGS = -Wall -Wextra -Wconversion -O2 -fPIC
++MKOCTFILE = $(PREFIX_BIN)/mkoctfile -v
++OCTMEX = $(MKOCTFILE) --mex
RM = rm
- MEX_OPTION += -lgomp CC\#$(CXX) CXX\#$(CXX) CFLAGS\#"$(CFLAGS)" CXXFLAGS\#"$(CFLAGS)"
+-ifneq (Darwin,$(shell uname))
+-CFLAGS += -fopenmp
+-MEX_OPTION += -lgomp
+-endif
+-
+-MEX_OPTION += CC\#$(CXX) CXX\#$(CXX) CFLAGS\#"$(CFLAGS)" CXXFLAGS\#"$(CFLAGS)"
-MATMEX = $(MATLABDIR)/bin/mex $(MEX_OPTION)
-+MKOCTFILE = mkoctfile$(OCTAVE_VERSION)
-+OCTMEX = $(MKOCTFILE) --mex
-+
-+FLIBS = ${shell $(MKOCTFILE) -p FLIBS}
-+INCFLAGS = ${shell $(MKOCTFILE) -p INCFLAGS}
-+INC_CSTDLIB = -include cstdlib
+-
+-PROGS = covm_mex.mex sumskipnan_mex.mex #
++PROGS = covm_mex.mex sumskipnan_mex.mex
- PROGS = covm_mex.mex sumskipnan_mex.mex #
+ ### per default only the mex-files for octave are built
+-mex4o octave: $(PROGS)
+-
+-
+-### Matlab configuration - search for a matlab directory if not defined above
+-ifndef MATLABDIR
+- ifneq (,$(shell ls -1 /usr/local/ |grep MATLAB))
+- # use oldest, typically mex-files a compatible with newer Matlab versions
+- MATLABDIR=/usr/local/MATLAB/$(shell ls -1t /usr/local/MATLAB/ |grep "^R*" |head -1)
+- # alternatively, use latest matlab version
+- #MATLABDIR=$(shell ls -dt1 /usr/local/MATLAB/R* |head -1)
+- endif
+-endif
+-
+-### if the MATLABDIR has been found or defined
+-ifneq (,MATLABDIR)
+- ifneq (,$(shell ls -1 $(MATLABDIR)/bin/mexext))
+- MEX_EXT=$(shell $(MATLABDIR)/bin/mexext)
+- mex4m matlab: $(patsubst %.mex, %.$(MEX_EXT), $(PROGS))
+- endif
+-endif
+-
+-
+-mexw32 win32: $(patsubst %.mex, %.mexw32, $(PROGS))
+-mexw64 win64: $(patsubst %.mex, %.mexw64, $(PROGS))
+-all: octave win32 win64 mex4m
+-
+-clean:
+- -$(RM) *.o *.obj *.o64 core octave-core *.oct *~ *.mex*
++octave: $(PROGS)
-@@ -88,10 +93,10 @@
++all: octave
+
+ #########################################################
+-
# Octave, MATLAB on Linux
#########################################################
- %.oct: %.cc
+-%.oct: %.cc
- mkoctfile$(OCTAVE_VERSION) "$<"
-+ $(MKOCTFILE) $<
%.mex: %.cpp
-- $(OCTMEX) "$<" -lgomp -llapack -lblas ## Octave
-+ INCFLAGS="$(INCFLAGS) $(INC_CSTDLIB)" $(OCTMEX) $< $(FLIBS) -lgomp ## Octave
- %.$(MEX_EXT): %.cpp
- $(MATMEX) "$<" -lgomp -llapack -lblas ## Matlab
-
+ $(OCTMEX) "$<" -llapack -lblas
+-%.$(MEX_EXT): %.cpp
+- $(MATMEX) "$<" -llapack -lblas
+-
+-
+-#########################################################
+-# MATLAB/WIN32
+-#########################################################
+-%.obj: %.cpp
+- $(CROSS)-$(CXX) -fopenmp -c -DMATLAB_MEX_FILE -x c++ -o "$@" $(W32MAT_INC) -O2 -DMX_COMPAT_32 "$<"
+-%.obj: %.c
+- $(CROSS)-$(CXX) -fopenmp -c -DMATLAB_MEX_FILE -x c++ -o "$@" $(W32MAT_INC) -O2 -DMX_COMPAT_32 "$<"
+-
+-%.mexw32: %.obj
+- $(CROSS)-$(CXX) -shared $(GNUMEX)/mex.def -o "$@" -L$(GNUMEX) -s "$<" -llibmx -llibmex -llibmat -lcholmod -lgomp -lpthread -L$(LDLIBS_W32) -lblas -llapack
+-
+-
+-#########################################################
+-# MATLAB/WIN64
+-#########################################################
+-
+-## ToDO: fix OpenMP support: currently -fopenmp causes Matlab to crash
+-%.o64: %.cpp
+- $(CROSS64)-$(CXX) -c -DMATLAB_MEX_FILE -x c++ -o "$@" $(W64MAT_INC) -O2 "$<"
+-%.o64: %.c
+- $(CROSS64)-$(CXX) -c -DMATLAB_MEX_FILE -x c++ -o "$@" $(W64MAT_INC) -O2 "$<"
+-
+-%.mexw64: %.o64
+- $(CROSS64)-$(CXX) -shared $(GNUMEX64)/mex.def -o "$@" -L$(GNUMEX64) -s "$<" -llibmx -llibmex -llibmat -lcholmod -lgomp -lpthread -L$(LDLIBS_W64) -lblas -llapack
+-
+-
+-
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