[133488] trunk/dports/science

[ryandesign at macports.org]

Revision: 133488
          https://trac.macports.org/changeset/133488
Author:   ryandesign at macports.org
Date:     2015-03-02 21:26:41 -0800 (Mon, 02 Mar 2015)
Log Message:
-----------
bcftools: new port, version 1.2 (#46883)

Added Paths:
-----------
    trunk/dports/science/bcftools/
    trunk/dports/science/bcftools/Portfile

Added: trunk/dports/science/bcftools/Portfile
===================================================================
--- trunk/dports/science/bcftools/Portfile	                        (rev 0)
+++ trunk/dports/science/bcftools/Portfile	2015-03-03 05:26:41 UTC (rev 133488)
@@ -0,0 +1,43 @@
+# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
+# $Id$
+
+PortSystem              1.0
+PortGroup               github 1.0
+
+github.setup            samtools bcftools 1.2
+categories              science
+platforms               darwin
+maintainers             ryandesign openmaintainer
+license                 {MIT GPL-3}
+
+description             utilities for variant calling and manipulating VCF and \
+                        BCF files
+
+long_description        BCFtools implements utilities for variant calling (in \
+                        conjunction with SAMtools) and manipulating VCF and \
+                        BCF files. The program is intended to replace the \
+                        Perl-based tools from vcftools.
+
+checksums               rmd160  84be17525ff3106d3193ed262e70edbaf60495f0 \
+                        sha256  53c628339020dd45334a007c9cefdaf1cba3f1032492ec813b116379fa684fd6
+
+homepage                http://www.htslib.org/
+github.tarball_from     releases
+use_bzip2               yes
+
+depends_lib             port:zlib
+
+use_configure           no
+
+variant universal {}
+
+build.args              CC="${configure.cc} [get_canonical_archflags cc]"
+
+destroot.args-append    prefix=${prefix}
+
+post-destroot {
+    xinstall -d ${destroot}${prefix}/share/doc/${name}
+    xinstall -m 644 -W ${worksrcpath} \
+        AUTHORS LICENSE README \
+        ${destroot}${prefix}/share/doc/${name}
+}


Property changes on: trunk/dports/science/bcftools/Portfile
___________________________________________________________________
Added: svn:keywords
   + Id
Added: svn:eol-style
   + native
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.macosforge.org/pipermail/macports-changes/attachments/20150302/4078d811/attachment.html>