[macports-ports] branch master updated (74968728d05 -> e12cfe008f0)

[Herby Gillot]

Herby Gillot (herbygillot) pushed a change to branch master
in repository macports-ports.

    from 74968728d05 R-DelayedMatrixStats: update to 1.22.0
     new 2d2808980f6 R-BiocBaseUtils: update to 1.2.0
     new ed7fbf88da2 R-BiocCheck: update to 1.36.0
     new 89e5d668132 R-biocViews: update to 1.68.0
     new a1993c9a4d3 R-bioDist: update to 1.72.0
     new 34a9e3d2d3c R-BiocStyle: update to 2.28.0
     new 4496b8d2bfc R-ScaledMatrix: update to 1.7.1
     new 71fe6b7c88b R-DelayedRandomArray: new port
     new e8284221bb7 R-BiocSingular: update to 1.16.0
     new 76df05d3e7f R-BiocNeighbors: update to 1.18.0
     new 1202be80fc5 R-kebabs: update to 1.34.0
     new c4612388283 R-limma: update to 3.56.0
     new af1e41a630f R-marray: new port
     new cd7295c67b9 R-qvalue: update to 2.32.0
     new c5eda5ce97d R-RaggedExperiment: update to 1.24.0
     new 8ffbc97853e R-graph: update to 1.78.0
     new b6ceec8a4bd R-RBGL: update to 1.76.0
     new 911030ff387 R-Rgraphviz: update to 2.44.0
     new 42873c88a13 Rhdf5lib: update to 1.22.0
     new 238ab67748f R-rhdf5filters: update to 1.12.0, drop the patch
     new fe89339a56f R-rhdf5: update to 2.44.0
     new 22f1cf818a2 R-HDF5Array: update to 1.28.0
     new 6c02373f490 R-KEGGgraph: new port
     new 13acce75f5d R-SPIA: new port
     new 226f9f8e5f2 R-dir.expiry: new port
     new cb328fafaff R-BioNet: update to 1.60.0
     new e12cfe008f0 R-BSgenome: new port

The 26 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.


Summary of changes:
 R/R-BSgenome/Portfile                              | 26 +++++++++++++++++++
 R/R-BioNet/Portfile                                | 10 ++++----
 R/R-BiocBaseUtils/Portfile                         | 10 ++++----
 R/R-BiocCheck/Portfile                             | 13 +++++-----
 R/R-BiocNeighbors/Portfile                         | 10 ++++----
 R/R-BiocSingular/Portfile                          | 10 ++++----
 R/R-BiocStyle/Portfile                             | 10 ++++----
 R/R-DelayedRandomArray/Portfile                    | 27 +++++++++++++++++++
 R/R-HDF5Array/Portfile                             | 10 ++++----
 R/R-KEGGgraph/Portfile                             | 30 ++++++++++++++++++++++
 R/R-KEGGgraph/files/patch-missing-test-deps.diff   | 12 +++++++++
 R/R-RBGL/Portfile                                  | 16 ++++++------
 R/R-RaggedExperiment/Portfile                      | 10 ++++----
 R/R-Rgraphviz/Portfile                             | 10 ++++----
 R/R-Rhdf5lib/Portfile                              | 10 ++++----
 R/R-SPIA/Portfile                                  | 25 ++++++++++++++++++
 R/R-SPIA/files/patch-missing-test-deps.diff        | 11 ++++++++
 R/R-ScaledMatrix/Portfile                          | 11 ++++----
 R/R-bioDist/Portfile                               | 10 ++++----
 R/R-biocViews/Portfile                             | 10 ++++----
 R/R-dir.expiry/Portfile                            | 24 +++++++++++++++++
 R/R-graph/Portfile                                 | 10 ++++----
 R/R-kebabs/Portfile                                | 13 ++++------
 R/R-limma/Portfile                                 | 10 ++++----
 R/R-marray/Portfile                                | 17 ++++++++++++
 R/R-qvalue/Portfile                                | 10 ++++----
 R/R-rhdf5/Portfile                                 | 10 ++++----
 R/R-rhdf5filters/Portfile                          | 13 ++++------
 .../files/0001-liblzf-fix-build-on-macOS.patch     | 24 -----------------
 29 files changed, 278 insertions(+), 134 deletions(-)
 create mode 100644 R/R-BSgenome/Portfile
 create mode 100644 R/R-DelayedRandomArray/Portfile
 create mode 100644 R/R-KEGGgraph/Portfile
 create mode 100644 R/R-KEGGgraph/files/patch-missing-test-deps.diff
 create mode 100644 R/R-SPIA/Portfile
 create mode 100644 R/R-SPIA/files/patch-missing-test-deps.diff
 create mode 100644 R/R-dir.expiry/Portfile
 create mode 100644 R/R-marray/Portfile
 delete mode 100644 R/R-rhdf5filters/files/0001-liblzf-fix-build-on-macOS.patch