[macports-ports] branch master updated (e327134828f -> 20d19bb910c)

[Herby Gillot]

Herby Gillot (herbygillot) pushed a change to branch master
in repository macports-ports.

    from e327134828f flyctl: update to 0.1.112
     new b9ef4a3aa69 R-ShortRead: update to 1.61.0
     new c4a023a353d R-GenomeInfoDb: update to 1.39.0
     new 04bd761c9e5 R-Biostrings: update to 2.71.1
     new a1b10ccf7d7 R-XVector: update to 0.43.0, support testing
     new 427f4a265c2 R-Rhdf5lib: update to 1.24.0
     new 0cd4d6a2c8e R-GenomicRanges: update to 1.55.0
     new 3ed2cd0ff77 R-Rhtslib: update to 2.5.0
     new 084e7538700 R-Rsamtools: update to 2.19.0
     new 79475c5d0b7 R-MatrixGenerics: update to 1.15.0
     new f6fb28fa483 R-S4Arrays: update to 1.3.0
     new 3c5641be273 R-SparseArray: update to 1.3.0
     new 2f9ef5e3e61 R-DelayedArray: update to 0.29.0
     new c4b12957a6e R-SummarizedExperiment: update to 1.33.0
     new da0e5240769 R-GenomicAlignments: update to 1.38.0
     new 33bc7979476 R-KEGGREST: update to 1.43.0
     new 5db4bbd93c4 R-AnnotationDbi: update to 1.65.0
     new 4a002ffaf5d R-biomaRt: update to 2.58.0
     new bc9e0caf5cd R-rtracklayer: update to 1.62.0
     new fa7cf0725cd R-GenomicFeatures: update to 1.55.0
     new cb96459a773 R-IRanges: update to 2.37.0, support testing
     new 26967db6d4b R-KEGGgraph: update to 1.62.0
     new 2b5d553594b R-AnnotationForge: update to 1.45.0
     new e510c2753dc R-BioNet: update to 1.62.0
     new 0e26b776df0 R-ResidualMatrix: update to 1.12.0
     new ae6e96c241f R-ScaledMatrix: update to 1.10.0
     new 18091decce1 R-sparseMatrixStats: update to 1.14.0
     new 597ffed88e7 R-DelayedMatrixStats: update to 1.24.0
     new 20d19bb910c R-DelayedRandomArray: update to 1.10.0

The 28 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.


Summary of changes:
 R/R-AnnotationDbi/Portfile                         | 11 ++++++-----
 R/R-AnnotationForge/Portfile                       | 10 +++++-----
 R/R-BioNet/Portfile                                |  8 ++++----
 R/R-Biostrings/Portfile                            | 10 +++++-----
 R/R-DelayedArray/Portfile                          | 12 ++++++------
 R/R-DelayedMatrixStats/Portfile                    | 13 ++++++-------
 R/R-DelayedRandomArray/Portfile                    |  8 ++++----
 R/R-GenomeInfoDb/Portfile                          | 12 ++++++------
 R/R-GenomicAlignments/Portfile                     |  8 ++++----
 R/R-GenomicFeatures/Portfile                       | 12 ++++++------
 R/R-GenomicRanges/Portfile                         | 10 +++++-----
 R/R-IRanges/Portfile                               | 22 +++++++++++++++++-----
 .../files/patch-remove-unavailable-suggests.diff   | 11 +++++++++++
 R/R-KEGGREST/Portfile                              | 11 ++++++-----
 R/R-KEGGgraph/Portfile                             |  8 ++++----
 R/R-MatrixGenerics/Portfile                        | 11 ++++++-----
 R/R-ResidualMatrix/Portfile                        |  8 ++++----
 R/R-Rhdf5lib/Portfile                              | 10 +++++-----
 R/R-Rhtslib/Portfile                               | 12 ++++++------
 R/R-Rsamtools/Portfile                             | 12 ++++++------
 R/R-S4Arrays/Portfile                              | 11 ++++++-----
 R/R-ScaledMatrix/Portfile                          |  8 ++++----
 R/R-ShortRead/Portfile                             | 10 +++++-----
 R/R-SparseArray/Portfile                           | 11 ++++++-----
 R/R-SummarizedExperiment/Portfile                  | 11 ++++++-----
 R/R-XVector/Portfile                               | 17 ++++++++++++-----
 R/R-XVector/files/patch-no-drosophila2probe.diff   | 11 +++++++++++
 R/R-biomaRt/Portfile                               | 10 ++++------
 R/R-rtracklayer/Portfile                           | 11 +++++------
 R/R-sparseMatrixStats/Portfile                     | 11 +++++------
 30 files changed, 186 insertions(+), 144 deletions(-)
 create mode 100644 R/R-IRanges/files/patch-remove-unavailable-suggests.diff
 create mode 100644 R/R-XVector/files/patch-no-drosophila2probe.diff