[MacPorts] #20491: shogun-0.7.3 python modular crashes silently with Abort trap

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Mon Aug 24 13:05:57 PDT 2009


#20491: shogun-0.7.3 python modular crashes silently with Abort trap
-------------------------------------------+--------------------------------
 Reporter:  rike.schuppner@…               |       Owner:  mcalhoun@…           
     Type:  defect                         |      Status:  new                  
 Priority:  Normal                         |   Milestone:                       
Component:  ports                          |     Version:                       
 Keywords:                                 |        Port:  shogun               
-------------------------------------------+--------------------------------
Changes (by jameskyle@…):

  * owner:  jameskyle@… => mcalhoun@…


Comment:

 I think I have found the potential in this error. It seems the numpy core
 is linking against the system blas/lapack instead of the macports atlas
 build.

 {{{
 /Users/jkyle/Projects/macports/mports/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6
 /site-packages/numpy//core/_dotblas.so:
 /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate
 (compatibility version 1.0.0, current version 4.0.0)
         /usr/lib/libgcc_s.1.dylib (compatibility version 1.0.0, current
 version 1.0.0)
         /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current
 version 111.1.4)
         /System/Library/Frameworks/vecLib.framework/Versions/A/vecLib
 (compatibility version 1.0.0, current version 242.0.0)
 }}}

 I'm sure this is not good and the traceback goes straight to the veclib
 library. I would wager that your personal install of shogun and/or ipython
 are all linking against the same libraries. You could varify this of
 course with otool -L.

 Since the issue lies in another package, I am reassigning this ticket to
 the numpy maintainer.

-- 
Ticket URL: <http://trac.macports.org/ticket/20491#comment:7>
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