[MacPorts] #20868: py25-numpy fails in staging on 10.6

MacPorts noreply at macports.org
Fri Aug 28 16:01:37 PDT 2009 

#20868: py25-numpy fails in staging on 10.6
----------------------------------+-----------------------------------------
 Reporter:  john_owens@…          |       Owner:  macports-tickets@…                   
     Type:  defect                |      Status:  new                                  
 Priority:  Normal                |   Milestone:                                       
Component:  ports                 |     Version:                                       
 Keywords:  snowleopard           |        Port:  py25-numpy                           
----------------------------------+-----------------------------------------
 First the non-verbose, then the verbose.

 {{{
 $ sudo port install py25-numpy
 --->  Computing dependencies for py25-numpy
 --->  Staging py25-numpy into destroot
 Error: Target org.macports.destroot returned: error renaming
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/bin/f2py":
 no such file or directory
 }}}
 $ sudo port -v install py25-numpy
 --->  Computing dependencies for py25-numpy.
 --->  Staging py25-numpy into destroot
 . missing (directory not created: File exists)
 ./Applications missing (directory not created: File exists)
 ./Developer missing (directory not created: File exists)
 ./Library missing (directory not created: File exists)
 Running from numpy source directory.
 non-existing path in 'numpy/distutils': 'site.cfg'
 F2PY Version 2
 blas_opt_info:
   FOUND:
     extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
     define_macros = [('NO_ATLAS_INFO', 3)]
     extra_compile_args = ['-msse3',
 '-I/System/Library/Frameworks/vecLib.framework/Headers']

 lapack_opt_info:
   FOUND:
     extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
     define_macros = [('NO_ATLAS_INFO', 3)]
     extra_compile_args = ['-msse3']

 running install
 running build
 running config_cc
 unifing config_cc, config, build_clib, build_ext, build commands
 --compiler options
 running config_fc
 unifing config_fc, config, build_clib, build_ext, build commands
 --fcompiler options
 running build_src
 building py_modules sources
 building library "npymath" sources
 building extension "numpy.core._sort" sources
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/config.h' to
 sources.
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/numpyconfig.h' to
 sources.
 executing numpy/core/code_generators/generate_numpy_api.py
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__multiarray_api.h'
 to sources.
 numpy.core - nothing done with h_files =
 ['build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/config.h',
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/numpyconfig.h',
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__multiarray_api.h']
 building extension "numpy.core.multiarray" sources
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/config.h' to
 sources.
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/numpyconfig.h' to
 sources.
 executing numpy/core/code_generators/generate_numpy_api.py
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__multiarray_api.h'
 to sources.
   adding 'build/src.macosx-10.6-i386-2.5/numpy/core/src' to include_dirs.
 numpy.core - nothing done with h_files =
 ['build/src.macosx-10.6-i386-2.5/numpy/core/src/scalartypes.inc',
 'build/src.macosx-10.6-i386-2.5/numpy/core/src/arraytypes.inc',
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/config.h',
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/numpyconfig.h',
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__multiarray_api.h']
 building extension "numpy.core.umath" sources
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/config.h' to
 sources.
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/numpyconfig.h' to
 sources.
 executing numpy/core/code_generators/generate_ufunc_api.py
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__ufunc_api.h' to
 sources.
   adding 'build/src.macosx-10.6-i386-2.5/numpy/core/src' to include_dirs.
 numpy.core - nothing done with h_files =
 ['build/src.macosx-10.6-i386-2.5/numpy/core/src/scalartypes.inc',
 'build/src.macosx-10.6-i386-2.5/numpy/core/src/arraytypes.inc',
 'build/src.macosx-10.6-i386-2.5/numpy/core/src/umath_funcs.inc',
 'build/src.macosx-10.6-i386-2.5/numpy/core/src/umath_loops.inc',
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/config.h',
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/numpyconfig.h',
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__ufunc_api.h']
 building extension "numpy.core.scalarmath" sources
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/config.h' to
 sources.
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/numpyconfig.h' to
 sources.
 executing numpy/core/code_generators/generate_numpy_api.py
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__multiarray_api.h'
 to sources.
 executing numpy/core/code_generators/generate_ufunc_api.py
   adding
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__ufunc_api.h' to
 sources.
 numpy.core - nothing done with h_files =
 ['build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/config.h',
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/numpyconfig.h',
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__multiarray_api.h',
 'build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__ufunc_api.h']
 building extension "numpy.core._dotblas" sources
   adding 'numpy/core/blasdot/_dotblas.c' to sources.
 building extension "numpy.core.umath_tests" sources
 building extension "numpy.lib._compiled_base" sources
 building extension "numpy.numarray._capi" sources
 building extension "numpy.fft.fftpack_lite" sources
 building extension "numpy.linalg.lapack_lite" sources
   adding 'numpy/linalg/lapack_litemodule.c' to sources.
   adding 'numpy/linalg/python_xerbla.c' to sources.
 building extension "numpy.random.mtrand" sources
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/numpy-1.3.0/numpy/distutils/command/config.py:39:
 DeprecationWarning:
 +++++++++++++++++++++++++++++++++++++++++++++++++
 Usage of try_run is deprecated: please do not
 use it anymore, and avoid configuration checks
 involving running executable on the target machine.
 +++++++++++++++++++++++++++++++++++++++++++++++++

   DeprecationWarning)
 customize NAGFCompiler
 Could not locate executable f95
 customize AbsoftFCompiler
 Could not locate executable f90
 Could not locate executable f77
 customize IBMFCompiler
 Could not locate executable xlf90
 Could not locate executable xlf
 customize IntelFCompiler
 Could not locate executable ifort
 Could not locate executable ifc
 customize GnuFCompiler
 Could not locate executable g77
 customize Gnu95FCompiler
 Could not locate executable gfortran
 customize G95FCompiler
 Could not locate executable g95
 don't know how to compile Fortran code on platform 'posix'
 C compiler: /usr/bin/gcc-4.2 -fno-strict-aliasing -mno-fused-madd -DNDEBUG
 -g -fwrapv -O3 -Wall -Wstrict-prototypes

 compile options: '-Inumpy/core/src -Inumpy/core/include
 -I/opt/local/include/python2.5 -c'
 gcc-4.2: _configtest.c
 /usr/bin/gcc-4.2 _configtest.o -o _configtest
 _configtest
 failure.
 removing: _configtest.c _configtest.o _configtest
 building data_files sources
 running build_py
 copying numpy/version.py -> build/lib.macosx-10.6-i386-2.5/numpy
 copying build/src.macosx-10.6-i386-2.5/numpy/__config__.py ->
 build/lib.macosx-10.6-i386-2.5/numpy
 copying build/src.macosx-10.6-i386-2.5/numpy/distutils/__config__.py ->
 build/lib.macosx-10.6-i386-2.5/numpy/distutils
 running build_clib
 customize UnixCCompiler
 customize UnixCCompiler using build_clib
 running build_ext
 customize UnixCCompiler
 customize UnixCCompiler using build_ext
 running scons
 running build_scripts
   adding 'build/scripts.macosx-10.6-i386-2.5/f2py2.5' to scripts
 running install_lib
 copying build/lib.macosx-10.6-i386-2.5/numpy/__config__.py ->
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy
 copying build/lib.macosx-10.6-i386-2.5/numpy/distutils/__config__.py ->
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy/distutils
 copying build/lib.macosx-10.6-i386-2.5/numpy/version.py ->
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy
 byte-compiling
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy/__config__.py to __config__.pyc
 byte-compiling
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy/distutils/__config__.py to __config__.pyc
 byte-compiling
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy/version.py to version.pyc
 running install_scripts
 changing mode of
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/bin/f2py2.5
 to 755
 running install_data
 copying
 build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__multiarray_api.h
 ->
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy/core/include/numpy
 copying
 build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/multiarray_api.txt
 ->
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy/core/include/numpy
 copying
 build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/__ufunc_api.h ->
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy/core/include/numpy
 copying
 build/src.macosx-10.6-i386-2.5/numpy/core/include/numpy/ufunc_api.txt ->
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy/core/include/numpy
 running install_egg_info
 Removing
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy-1.3.0-py2.5.egg-info
 Writing
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/lib/python2.5
 /site-packages/numpy-1.3.0-py2.5.egg-info
 Error: Target org.macports.destroot returned: error renaming
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-numpy/work/destroot/opt/local/bin/f2py":
 no such file or directory
 Warning: the following items did not execute (for py25-numpy):
 org.macports.activate org.macports.destroot org.macports.install
 Error: Status 1 encountered during processing.
 {{{

-- 
Ticket URL: <http://trac.macports.org/ticket/20868>
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