[MacPorts] #21773: octave-3.2.2 -- build failure -- Undefined symbols: "_znaupd_"

MacPorts noreply at macports.org
Fri Oct 2 08:29:33 PDT 2009


#21773: octave-3.2.2 -- build failure -- Undefined symbols: "_znaupd_"
------------------------------+---------------------------------------------
 Reporter:  bpabbott@…        |       Owner:  macports-tickets@…                   
     Type:  defect            |      Status:  new                                  
 Priority:  Normal            |   Milestone:                                       
Component:  ports             |     Version:  1.8.1                                
 Keywords:  gcc43             |        Port:  octave                               
------------------------------+---------------------------------------------
 Dual 2.3 GHz PowerPC G5 running 10.5.8

 Below is the result of my attempt to build Octave.

 $ sudo port install octave
 --->  Fetching octave
 --->  Attempting to fetch octave-3.2.2.tar.gz from
 ftp://ftp.gnu.org/pub/gnu/octave/
 --->  Verifying checksum(s) for octave
 --->  Extracting octave
 --->  Applying patches to octave
 --->  Configuring octave
 --->  Building octave
 Error: Target org.macports.build returned: shell command " cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_www.macports.org_files_ports_math_octave/work/octave-3.2.2"
 && /usr/bin/make -j2 all " returned error 2
 Command output: /opt/local/bin/g++-mp-4.3 -bundle -bundle_loader
 ../src/octave -L/opt/local/lib -o daspk.oct daspk.o -L../libcruft -lcruft
 -L../liboctave -loctave -L. -loctinterp -lcholmod -lmetis -lumfpack -lamd
 -lcamd -lcolamd -lccolamd -lcxsparse  -lfftw3 -lfftw3f -lqrupdate -larpack
 -lreadline  -lncurses -framework Accelerate -lhdf5 -lz -lm
 -L/opt/local/lib -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4/../../.. -lhdf5 -lz -lm
 -lgfortranbegin -lgfortran -lSystemStubs
 /opt/local/bin/g++-mp-4.3 -bundle -bundle_loader ../src/octave
 -L/opt/local/lib -o dasrt.oct dasrt.o -L../libcruft -lcruft -L../liboctave
 -loctave -L. -loctinterp -lcholmod -lmetis -lumfpack -lamd -lcamd -lcolamd
 -lccolamd -lcxsparse  -lfftw3 -lfftw3f -lqrupdate -larpack -lreadline
 -lncurses -framework Accelerate -lhdf5 -lz -lm  -L/opt/local/lib
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4/../../.. -lhdf5 -lz -lm
 -lgfortranbegin -lgfortran -lSystemStubs
 /opt/local/bin/g++-mp-4.3 -bundle -bundle_loader ../src/octave
 -L/opt/local/lib -o dassl.oct dassl.o -L../libcruft -lcruft -L../liboctave
 -loctave -L. -loctinterp -lcholmod -lmetis -lumfpack -lamd -lcamd -lcolamd
 -lccolamd -lcxsparse  -lfftw3 -lfftw3f -lqrupdate -larpack -lreadline
 -lncurses -framework Accelerate -lhdf5 -lz -lm  -L/opt/local/lib
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4/../../.. -lhdf5 -lz -lm
 -lgfortranbegin -lgfortran -lSystemStubs
 /opt/local/bin/g++-mp-4.3 -bundle -bundle_loader ../src/octave
 -L/opt/local/lib -o det.oct det.o -L../libcruft -lcruft -L../liboctave
 -loctave -L. -loctinterp -lcholmod -lmetis -lumfpack -lamd -lcamd -lcolamd
 -lccolamd -lcxsparse  -lfftw3 -lfftw3f -lqrupdate -larpack -lreadline
 -lncurses -framework Accelerate -lhdf5 -lz -lm  -L/opt/local/lib
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4/../../.. -lhdf5 -lz -lm
 -lgfortranbegin -lgfortran -lSystemStubs
 /opt/local/bin/g++-mp-4.3 -bundle -bundle_loader ../src/octave
 -L/opt/local/lib -o dispatch.oct dispatch.o -L../libcruft -lcruft
 -L../liboctave -loctave -L. -loctinterp -lcholmod -lmetis -lumfpack -lamd
 -lcamd -lcolamd -lccolamd -lcxsparse  -lfftw3 -lfftw3f -lqrupdate -larpack
 -lreadline  -lncurses -framework Accelerate -lhdf5 -lz -lm
 -L/opt/local/lib -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4/../../.. -lhdf5 -lz -lm
 -lgfortranbegin -lgfortran -lSystemStubs
 /opt/local/bin/g++-mp-4.3 -bundle -bundle_loader ../src/octave
 -L/opt/local/lib -o dlmread.oct dlmread.o -L../libcruft -lcruft
 -L../liboctave -loctave -L. -loctinterp -lcholmod -lmetis -lumfpack -lamd
 -lcamd -lcolamd -lccolamd -lcxsparse  -lfftw3 -lfftw3f -lqrupdate -larpack
 -lreadline  -lncurses -framework Accelerate -lhdf5 -lz -lm
 -L/opt/local/lib -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4/../../.. -lhdf5 -lz -lm
 -lgfortranbegin -lgfortran -lSystemStubs
 /opt/local/bin/g++-mp-4.3 -bundle -bundle_loader ../src/octave
 -L/opt/local/lib -o dmperm.oct dmperm.o -L../libcruft -lcruft
 -L../liboctave -loctave -L. -loctinterp -lcholmod -lmetis -lumfpack -lamd
 -lcamd -lcolamd -lccolamd -lcxsparse  -lfftw3 -lfftw3f -lqrupdate -larpack
 -lreadline  -lncurses -framework Accelerate -lhdf5 -lz -lm
 -L/opt/local/lib -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4/../../.. -lhdf5 -lz -lm
 -lgfortranbegin -lgfortran -lSystemStubs
 /opt/local/bin/g++-mp-4.3 -bundle -bundle_loader ../src/octave
 -L/opt/local/lib -o eig.oct eig.o -L../libcruft -lcruft -L../liboctave
 -loctave -L. -loctinterp -lcholmod -lmetis -lumfpack -lamd -lcamd -lcolamd
 -lccolamd -lcxsparse  -lfftw3 -lfftw3f -lqrupdate -larpack -lreadline
 -lncurses -framework Accelerate -lhdf5 -lz -lm  -L/opt/local/lib
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4/../../.. -lhdf5 -lz -lm
 -lgfortranbegin -lgfortran -lSystemStubs
 /opt/local/bin/g++-mp-4.3 -bundle -bundle_loader ../src/octave
 -L/opt/local/lib -o eigs.oct eigs.o -L../libcruft -lcruft -L../liboctave
 -loctave -L. -loctinterp -lcholmod -lmetis -lumfpack -lamd -lcamd -lcolamd
 -lccolamd -lcxsparse  -lfftw3 -lfftw3f -lqrupdate -larpack -lreadline
 -lncurses -framework Accelerate -lhdf5 -lz -lm  -L/opt/local/lib
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4/../../.. -lhdf5 -lz -lm
 -lgfortranbegin -lgfortran -lSystemStubs -larpack
 /opt/local/bin/g++-mp-4.3 -bundle -bundle_loader ../src/octave
 -L/opt/local/lib -o fft.oct fft.o -L../libcruft -lcruft -L../liboctave
 -loctave -L. -loctinterp -lcholmod -lmetis -lumfpack -lamd -lcamd -lcolamd
 -lccolamd -lcxsparse  -lfftw3 -lfftw3f -lqrupdate -larpack -lreadline
 -lncurses -framework Accelerate -lhdf5 -lz -lm  -L/opt/local/lib
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4/../../.. -lhdf5 -lz -lm
 -lgfortranbegin -lgfortran -lSystemStubs
 /opt/local/bin/g++-mp-4.3 -bundle -bundle_loader ../src/octave
 -L/opt/local/lib -o fft2.oct fft2.o -L../libcruft -lcruft -L../liboctave
 -loctave -L. -loctinterp -lcholmod -lmetis -lumfpack -lamd -lcamd -lcolamd
 -lccolamd -lcxsparse  -lfftw3 -lfftw3f -lqrupdate -larpack -lreadline
 -lncurses -framework Accelerate -lhdf5 -lz -lm  -L/opt/local/lib
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4
 -L/opt/local/lib/gcc43/gcc/ppc-apple-darwin9/4.3.4/../../.. -lhdf5 -lz -lm
 -lgfortranbegin -lgfortran -lSystemStubs
 Undefined symbols:
   "_znaupd_", referenced from:
       EigsComplexNonSymmetricFunc(ComplexColumnVector
 (*)(ComplexColumnVector const&, int&), int, std::basic_string<char,
 std::char_traits<char>, std::allocator<char> > const&,
 std::complex<double>, int, int, int&, ComplexMatrix&,
 ComplexColumnVector&, ComplexColumnVector&, std::basic_ostream<char,
 std::char_traits<char> >&, double, int, bool, int, int) in eigs.o
       int EigsComplexNonSymmetricMatrix<ComplexMatrix>(ComplexMatrix
 const&, std::basic_string<char, std::char_traits<char>,
 std::allocator<char> >, int, int, int&, ComplexMatrix&,
 ComplexColumnVector&, ComplexMatrix const&, ColumnVector&,
 ComplexColumnVector&, std::basic_ostream<char, std::char_traits<char> >&,
 double, int, bool, int, int) in eigs.o
       int
 EigsComplexNonSymmetricMatrixShift<SparseComplexMatrix>(SparseComplexMatrix
 const&, std::complex<double>, int, int, int&, ComplexMatrix&,
 ComplexColumnVector&, SparseComplexMatrix const&, ColumnVector&,
 ComplexColumnVector&, std::basic_ostream<char, std::char_traits<char> >&,
 double, int, bool, int, int) in eigs.o
       int
 EigsComplexNonSymmetricMatrix<SparseComplexMatrix>(SparseComplexMatrix
 const&, std::basic_string<char, std::char_traits<char>,
 std::allocator<char> >, int, int, int&, ComplexMatrix&,
 ComplexColumnVector&, SparseComplexMatrix const&, ColumnVector&,
 ComplexColumnVector&, std::basic_ostream<char, std::char_traits<char> >&,
 double, int, bool, int, int) in eigs.o
       int EigsComplexNonSymmetricMatrixShift<ComplexMatrix>(ComplexMatrix
 const&, std::complex<double>, int, int, int&, ComplexMatrix&,
 ComplexColumnVector&, ComplexMatrix const&, ColumnVector&,
 ComplexColumnVector&, std::basic_ostream<char, std::char_traits<char> >&,
 double, int, bool, int, int) in eigs.o
   "_zneupd_", referenced from:
       EigsComplexNonSymmetricFunc(ComplexColumnVector
 (*)(ComplexColumnVector const&, int&), int, std::basic_string<char,
 std::char_traits<char>, std::allocator<char> > const&,
 std::complex<double>, int, int, int&, ComplexMatrix&,
 ComplexColumnVector&, ComplexColumnVector&, std::basic_ostream<char,
 std::char_traits<char> >&, double, int, bool, int, int) in eigs.o
       int EigsComplexNonSymmetricMatrix<ComplexMatrix>(ComplexMatrix
 const&, std::basic_string<char, std::char_traits<char>,
 std::allocator<char> >, int, int, int&, ComplexMatrix&,
 ComplexColumnVector&, ComplexMatrix const&, ColumnVector&,
 ComplexColumnVector&, std::basic_ostream<char, std::char_traits<char> >&,
 double, int, bool, int, int) in eigs.o
       int
 EigsComplexNonSymmetricMatrixShift<SparseComplexMatrix>(SparseComplexMatrix
 const&, std::complex<double>, int, int, int&, ComplexMatrix&,
 ComplexColumnVector&, SparseComplexMatrix const&, ColumnVector&,
 ComplexColumnVector&, std::basic_ostream<char, std::char_traits<char> >&,
 double, int, bool, int, int) in eigs.o
       int
 EigsComplexNonSymmetricMatrix<SparseComplexMatrix>(SparseComplexMatrix
 const&, std::basic_string<char, std::char_traits<char>,
 std::allocator<char> >, int, int, int&, ComplexMatrix&,
 ComplexColumnVector&, SparseComplexMatrix const&, ColumnVector&,
 ComplexColumnVector&, std::basic_ostream<char, std::char_traits<char> >&,
 double, int, bool, int, int) in eigs.o
       int EigsComplexNonSymmetricMatrixShift<ComplexMatrix>(ComplexMatrix
 const&, std::complex<double>, int, int, int&, ComplexMatrix&,
 ComplexColumnVector&, ComplexMatrix const&, ColumnVector&,
 ComplexColumnVector&, std::basic_ostream<char, std::char_traits<char> >&,
 double, int, bool, int, int) in eigs.o
 ld: symbol(s) not found
 collect2: ld returned 1 exit status
 make[2]: *** [eigs.oct] Error 1
 make[2]: *** Waiting for unfinished jobs....
 make[1]: *** [src] Error 2
 make: *** [all] Error 2

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Ticket URL: <http://trac.macports.org/ticket/21773>
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