[MacPorts] #23618: NCBI toolkit not compiling on Snow Leopard

[MacPorts]

#23618: NCBI toolkit not compiling on Snow Leopard
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 Reporter:  bkamel@…              |       Owner:  macports-tickets@…                   
     Type:  defect                |      Status:  new                                  
 Priority:  High                  |   Milestone:                                       
Component:  ports                 |     Version:  1.8.2                                
 Keywords:  NCBI, Bioinformatics  |        Port:  ncbi_tools                           
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 sudo port -d install ncbi_tools
 DEBUG: Found port in
 file:///opt/local/var/macports/sources/rsync.macports.org/release/ports/science/ncbi_tools
 DEBUG: Changing to port directory:
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/science/ncbi_tools
 DEBUG: OS Platform: darwin
 DEBUG: OS Version: 10.2.0
 DEBUG: Mac OS X Version: 10.6
 DEBUG: System Arch: i386
 DEBUG: setting option os.universal_supported to yes
 DEBUG: org.macports.load registered provides 'load', a pre-existing
 procedure. Target override will not be provided
 DEBUG: org.macports.unload registered provides 'unload', a pre-existing
 procedure. Target override will not be provided
 DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-
 existing procedure. Target override will not be provided
 DEBUG: not using configure, so not adding the default universal variant
 DEBUG: Requested variant darwin is not provided by port ncbi_tools.
 DEBUG: Requested variant i386 is not provided by port ncbi_tools.
 DEBUG: Requested variant macosx is not provided by port ncbi_tools.
 --->  Computing dependencies for ncbi_tools
 DEBUG: Executing org.macports.main (ncbi_tools)
 DEBUG: Skipping completed org.macports.fetch (ncbi_tools)
 DEBUG: Skipping completed org.macports.checksum (ncbi_tools)
 DEBUG: Skipping completed org.macports.extract (ncbi_tools)
 DEBUG: Skipping completed org.macports.patch (ncbi_tools)
 DEBUG: Skipping completed org.macports.configure (ncbi_tools)
 --->  Building ncbi_tools
 DEBUG: Executing org.macports.build (ncbi_tools)
 DEBUG: Environment: MACOSX_DEPLOYMENT_TARGET='10.6'
 DEBUG: Assembled command: 'cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_ncbi_tools/work/"
 && './ncbi/make/makedis.csh' -j2'
 Unable to find the file -j2
 Error: Target org.macports.build returned: shell command " cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_ncbi_tools/work/"
 && './ncbi/make/makedis.csh' -j2 " returned error 1
 DEBUG: Backtrace: shell command " cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_ncbi_tools/work/"
 && './ncbi/make/makedis.csh' -j2 " returned error 1
     while executing
 "command_exec build"
     (procedure "portbuild::build_main" line 9)
     invoked from within
 "$procedure $targetname"
 Warning: the following items did not execute (for ncbi_tools):
 org.macports.activate org.macports.build org.macports.destroot
 org.macports.install
 Error: Status 1 encountered during processing.
 To report a bug, see <http://guide.macports.org/#project.tickets>

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Ticket URL: <http://trac.macports.org/ticket/23618>
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