[MacPorts] #23864: OpenMPI on slow leopard

MacPorts noreply at macports.org
Thu Feb 25 19:30:41 PST 2010


#23864: OpenMPI on slow leopard
--------------------------------+-------------------------------------------
 Reporter:  biobrain@…          |       Owner:  macports-tickets@…                   
     Type:  defect              |      Status:  new                                  
 Priority:  Normal              |   Milestone:                                       
Component:  ports               |     Version:  1.8.2                                
 Keywords:  openmpi             |        Port:  openmpi                              
--------------------------------+-------------------------------------------
 I am trying to install OpenMPI on snow leopard, I am getting the following
 error



 {{{

 sudo port install openmpi
 Password:
 Portfile changed since last build; discarding previous state.
 --->  Computing dependencies for openmpi
 --->  Fetching openmpi
 --->  Attempting to fetch openmpi-1.4.1.tar.bz2 from
 http://www.mirrorservice.org/sites/ftp.freebsd.org/pub/FreeBSD/ports/distfiles/
 --->  Attempting to fetch openmpi-1.4.1.tar.bz2 from
 http://www.mirrorservice.org/sites/ftp.freebsd.org/pub/FreeBSD/ports
 /local-distfiles/
 --->  Attempting to fetch openmpi-1.4.1.tar.bz2 from
 ftp://ftp.uk.FreeBSD.org/pub/FreeBSD/ports/distfiles/
 --->  Attempting to fetch openmpi-1.4.1.tar.bz2 from
 ftp://ftp.uk.FreeBSD.org/pub/FreeBSD/ports/local-distfiles/
 --->  Attempting to fetch openmpi-1.4.1.tar.bz2 from http://www.open-
 mpi.de/software/ompi/v1.4/downloads/
 --->  Verifying checksum(s) for openmpi
 --->  Extracting openmpi
 --->  Configuring openmpi
 --->  Building openmpi
 Error: Target org.macports.build returned: shell command " cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_openmpi/work/build"
 && /usr/bin/make -j2 all " returned error 2
 Command output: /opt/local/include/mpio.h:377: error: conflicting types
 for 'PMPI_File_read_ordered_end'
 ../../../../../../../ompi/include/mpi.h:1553: error: previous declaration
 of 'PMPI_File_read_ordered_end' was here
 /opt/local/include/mpio.h:379: error: conflicting types for
 'PMPI_File_write_ordered_begin'
 ../../../../../../../ompi/include/mpi.h:1555: error: previous declaration
 of 'PMPI_File_write_ordered_begin' was here
 /opt/local/include/mpio.h:380: error: conflicting types for
 'PMPI_File_write_ordered_end'
 ../../../../../../../ompi/include/mpi.h:1556: error: previous declaration
 of 'PMPI_File_write_ordered_end' was here
 /opt/local/include/mpio.h:384: error: conflicting types for
 'PMPI_File_get_type_extent'
 ../../../../../../../ompi/include/mpi.h:1558: error: previous declaration
 of 'PMPI_File_get_type_extent' was here
 /opt/local/include/mpio.h:387: error: conflicting types for
 'PMPI_File_set_atomicity'
 ../../../../../../../ompi/include/mpi.h:1559: error: previous declaration
 of 'PMPI_File_set_atomicity' was here
 /opt/local/include/mpio.h:388: error: conflicting types for
 'PMPI_File_get_atomicity'
 ../../../../../../../ompi/include/mpi.h:1560: error: previous declaration
 of 'PMPI_File_get_atomicity' was here
 /opt/local/include/mpio.h:389: error: conflicting types for
 'PMPI_File_sync'
 ../../../../../../../ompi/include/mpi.h:1561: error: previous declaration
 of 'PMPI_File_sync' was here
 /opt/local/include/mpio.h:392: error: conflicting types for
 'PMPI_File_set_errhandler'
 ../../../../../../../ompi/include/mpi.h:1479: error: previous declaration
 of 'PMPI_File_set_errhandler' was here
 /opt/local/include/mpio.h:393: error: conflicting types for
 'PMPI_File_get_errhandler'
 ../../../../../../../ompi/include/mpi.h:1480: error: previous declaration
 of 'PMPI_File_get_errhandler' was here
 /opt/local/include/mpio.h:409: error: conflicting types for
 'PMPI_File_f2c'
 ../../../../../../../ompi/include/mpi.h:1475: error: previous declaration
 of 'PMPI_File_f2c' was here
 /opt/local/include/mpio.h:410: error: conflicting types for
 'PMPI_File_c2f'
 ../../../../../../../ompi/include/mpi.h:1474: error: previous declaration
 of 'PMPI_File_c2f' was here
 make[5]: *** [ad_close.lo] Error 1
 make[5]: *** Waiting for unfinished jobs....
 make[5]: *** [ad_aggregate.lo] Error 1
 make[4]: *** [all-recursive] Error 1
 make[3]: *** [all-recursive] Error 1
 make[2]: *** [all-recursive] Error 1
 make[1]: *** [all-recursive] Error 1
 make: *** [all-recursive] Error 1

 }}}

-- 
Ticket URL: <http://trac.macports.org/ticket/23864>
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