[MacPorts] #25102: Installing "afni"

[MacPorts]

#25102: Installing "afni"
--------------------------------+-------------------------------------------
 Reporter:  frenchja@…          |       Owner:  macports-tickets@…                   
     Type:  defect              |      Status:  new                                  
 Priority:  Normal              |   Milestone:                                       
Component:  ports               |     Version:  1.8.2                                
 Keywords:  afni                |        Port:  afni                                 
--------------------------------+-------------------------------------------
 After the previous ticket was closed, I ran a sudo port sync && sudo port
 clean && sudo port install afni.

 {{{
 sudo port install afni
 Portfile changed since last build; discarding previous state.
 --->  Computing dependencies for afni
 --->  Fetching afni
 --->  Verifying checksum(s) for afni
 --->  Extracting afni
 --->  Applying patches to afni
 --->  Configuring afni
 --->  Building afni
 Error: Target org.macports.build returned: shell command " cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_afni/work/AFNI_2009_12_31_1431"
 && /usr/bin/make -j2 all plugins " returned error 2
 Command output: /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN
 -m64 -Wcomment -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp
 -DDONT_USE_MCW_MALLOC  -c eis_ratqr.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rebak.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rebakb.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_reduc.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_reduc2.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rg.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rgg.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rs.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rsb.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rsg.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rsgab.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rsgba.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rsm.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rsp.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rst.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_rt.c
 /usr/bin/gcc-4.2 -m64 -O0 -no-cpp-precomp -DFUNCNAME=svd_slow_ -c
 eis_svd.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_svd.c
 mv -f eis_svd.o eis_svd_slow.o
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_tinvit.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_tql1.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_tql2.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_tqlrat.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_trbak1.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_trbak3.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_tred1.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_tred2.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_tred3.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_tridib.c
 /usr/bin/gcc-4.2 -O3 -ftree-vectorize -ffast-math -DDARWIN -m64 -Wcomment
 -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp -DDONT_USE_MCW_MALLOC
 -c eis_tsturm.c

 Error: Status 1 encountered during processing.
 Before reporting a bug, first run the command again with the -d flag to
 get complete output.
 }}}

-- 
Ticket URL: <http://trac.macports.org/ticket/25102>
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