[MacPorts] #31415: netcdf 4.1.3 Error ld: library not found for -lsz

[MacPorts]

#31415: netcdf 4.1.3 Error ld: library not found for -lsz
-----------------------------------+----------------------------------------
 Reporter:  ryan.manger@…          |       Owner:  takeshi@…           
     Type:  defect                 |      Status:  new                 
 Priority:  Normal                 |   Milestone:                      
Component:  ports                  |     Version:  2.0.3               
 Keywords:                         |        Port:  netcdf              
-----------------------------------+----------------------------------------
Changes (by ryandesign@…):

  * owner:  macports-tickets@… => takeshi@…
  * port:  => netcdf


Old description:

> OS version - Lion 10.7.1[[BR]]
> XCode version 4.1 (4B110)
>
> make[4]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3/libcf/cfcheck'
> depbase=`echo cfcheck.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
>         /Developer/usr/bin/llvm-gcc-4.2 -DHAVE_CONFIG_H -I. -I..
> -I../src  -I../.. -I../../include -I../../liblib -I/opt/local/include
> -DNDEBUG  -pipe -O2 -fno-common -arch x86_64 -MT cfcheck.o -MD -MP -MF
> $depbase.Tpo -c -o cfcheck.o cfcheck.c &&\[[BR]]
>
>         mv -f $depbase.Tpo $depbase.Po
> /bin/sh ../libtool --tag=CC   --mode=link /Developer/usr/bin/llvm-gcc-4.2
> -pipe -O2 -fno-common -arch x86_64  ../../liblib/libnetcdf.la
> -L/opt/local/lib -lhdf5_hl -lhdf5 -lz -L/opt/local/lib -lsz -lm
> -L/opt/local/lib -arch x86_64 -L/opt/local/lib -o cfcheck cfcheck.o
> [[BR]]
> libtool: link: /Developer/usr/bin/llvm-gcc-4.2 -pipe -O2 -fno-common
> -arch x86_64 -arch x86_64 -o .libs/cfcheck cfcheck.o
> ../../liblib/.libs/libnetcdf.dylib -L/opt/local/lib
> /opt/local/lib/libcurl.dylib /opt/local/lib/libidn.dylib
> /opt/local/lib/libintl.dylib -lc /opt/local/lib/libiconv.dylib -lssl
> -lcrypto /opt/local/lib/libhdf5_hl.dylib /opt/local/lib/libhdf5.dylib -lz
> -lsz -lm[[BR]]
> ld: library not found for -lsz[[BR]]
> collect2: ld returned 1 exit status[[BR]]
> make[4]: *** [cfcheck] Error 1[[BR]]
> make[4]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3/libcf/cfcheck'[[BR]]
> make[3]: *** [all-recursive] Error 1[[BR]]
> make[3]: Leaving directory [[BR]]
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3/libcf'[[BR]]
> make[2]: *** [all] Error 2[[BR]]
> make[2]: Leaving
> directory`/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3/libcf'[[BR]]
> make[1]: *** [all-recursive] Error 1[[BR]]
> make[1]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3'[[BR]]
> make: *** [all] Error 2[[BR]]
> make: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3'[[BR]]
> shell command " cd
> "/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3"
> && /usr/bin/make -j4 -w all " returned error 2[[BR]]
> Error: Target org.macports.build returned: shell command failed (see log
> for details)[[BR]]
> DEBUG: Backtrace: shell command failed (see log for details)
>     while executing
> "command_exec build"
>     (procedure "portbuild::build_main" line 8)[[BR]]
>     invoked from within
> "$procedure $targetname"[[BR]]
> Warning: the following items did not execute (for netcdf):
> org.macports.activate org.macports.build org.macports.destroot
> org.macports.install[[BR]]
> Log for netcdf is at:
> /opt/local/var/macports/logs/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/main.log[[BR]]
> Error: Status 1 encountered during processing.[[BR]]
> To report a bug, see <http://guide.macports.org/#project.tickets>

New description:

 OS version - Lion 10.7.1[[BR]]
 XCode version 4.1 (4B110)

 {{{
 make[4]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3/libcf/cfcheck'
 depbase=`echo cfcheck.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
         /Developer/usr/bin/llvm-gcc-4.2 -DHAVE_CONFIG_H -I. -I..  -I../src
 -I../.. -I../../include -I../../liblib -I/opt/local/include -DNDEBUG
 -pipe -O2 -fno-common -arch x86_64 -MT cfcheck.o -MD -MP -MF $depbase.Tpo
 -c -o cfcheck.o cfcheck.c &&\

         mv -f $depbase.Tpo $depbase.Po
 /bin/sh ../libtool --tag=CC   --mode=link /Developer/usr/bin/llvm-gcc-4.2
 -pipe -O2 -fno-common -arch x86_64  ../../liblib/libnetcdf.la
 -L/opt/local/lib -lhdf5_hl -lhdf5 -lz -L/opt/local/lib -lsz -lm
 -L/opt/local/lib -arch x86_64 -L/opt/local/lib -o cfcheck cfcheck.o
 libtool: link: /Developer/usr/bin/llvm-gcc-4.2 -pipe -O2 -fno-common -arch
 x86_64 -arch x86_64 -o .libs/cfcheck cfcheck.o
 ../../liblib/.libs/libnetcdf.dylib -L/opt/local/lib
 /opt/local/lib/libcurl.dylib /opt/local/lib/libidn.dylib
 /opt/local/lib/libintl.dylib -lc /opt/local/lib/libiconv.dylib -lssl
 -lcrypto /opt/local/lib/libhdf5_hl.dylib /opt/local/lib/libhdf5.dylib -lz
 -lsz -lm
 ld: library not found for -lsz
 collect2: ld returned 1 exit status
 make[4]: *** [cfcheck] Error 1
 make[4]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3/libcf/cfcheck'
 make[3]: *** [all-recursive] Error 1
 make[3]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3/libcf'
 make[2]: *** [all] Error 2
 make[2]: Leaving
 directory`/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3/libcf'
 make[1]: *** [all-recursive] Error 1
 make[1]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3'
 make: *** [all] Error 2
 make: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3'
 shell command " cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/work/netcdf-4.1.3"
 && /usr/bin/make -j4 -w all " returned error 2
 Error: Target org.macports.build returned: shell command failed (see log
 for details)
 DEBUG: Backtrace: shell command failed (see log for details)
     while executing
 "command_exec build"
     (procedure "portbuild::build_main" line 8)
     invoked from within
 "$procedure $targetname"
 Warning: the following items did not execute (for netcdf):
 org.macports.activate org.macports.build org.macports.destroot
 org.macports.install
 Log for netcdf is at:
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_science_netcdf/netcdf/main.log
 Error: Status 1 encountered during processing.
 To report a bug, see <http://guide.macports.org/#project.tickets>
 }}}

--

Comment:

 Sounds like it needs a dependency on szip.

-- 
Ticket URL: <https://trac.macports.org/ticket/31415#comment:1>
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