[MacPorts] #35238: shogun: undefined symbols (was: Error when building shogun)

[MacPorts]

#35238: shogun: undefined symbols
-------------------------------+--------------------------------------------
  Reporter:  trandu@…          |       Owner:  macports-tickets@…                   
      Type:  defect            |      Status:  closed                               
  Priority:  Normal            |   Milestone:                                       
 Component:  ports             |     Version:  2.1.1                                
Resolution:  duplicate         |    Keywords:                                       
      Port:  shogun            |  
-------------------------------+--------------------------------------------
Changes (by ryandesign@…):

  * status:  new => closed
 * cc: jameskyle@… (added)
  * resolution:  => duplicate
  * port:  => shogun


Old description:

> bash-3.2$ sudo port install shogun
> --->  Computing dependencies for shogun
> --->  Fetching archive for shogun
> --->  Attempting to fetch shogun-0.9.3_0+gcc45.darwin_9.i386.tbz2 from
> http://packages.macports.org/shogun
> --->  Fetching distfiles for shogun
> --->  Verifying checksum(s) for shogun
> --->  Extracting shogun
> --->  Applying patches to shogun
> --->  Configuring shogun
> --->  Building shogun
> Error: org.macports.build for port shogun returned: command execution
> failed
> Please see the log file for port shogun for details:
> /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_shogun/shogun/main.log
> To report a bug, follow the instructions in the guide:
>     http://guide.macports.org/#project.tickets
> Error: Processing of port shogun failed

New description:

 {{{
 bash-3.2$ sudo port install shogun
 --->  Computing dependencies for shogun
 --->  Fetching archive for shogun
 --->  Attempting to fetch shogun-0.9.3_0+gcc45.darwin_9.i386.tbz2 from
 http://packages.macports.org/shogun
 --->  Fetching distfiles for shogun
 --->  Verifying checksum(s) for shogun
 --->  Extracting shogun
 --->  Applying patches to shogun
 --->  Configuring shogun
 --->  Building shogun
 Error: org.macports.build for port shogun returned: command execution
 failed
 Please see the log file for port shogun for details:
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_shogun/shogun/main.log
 To report a bug, follow the instructions in the guide:
     http://guide.macports.org/#project.tickets
 Error: Processing of port shogun failed
 }}}

--

Comment:

 Please remember to use WikiFormatting, to fill in the Port field, and to
 Cc the maintainer of that port.

 The errors in the log begin with:

 {{{
 :info:build Undefined symbols for architecture i386:
 :info:build   "_drot_", referenced from:
 :info:build       _dbdsqr_ in liblapack.a(dbdsqr.o)
 :info:build   "_dswap_", referenced from:
 :info:build       _dbdsqr_ in liblapack.a(dbdsqr.o)
 :info:build       _dsteqr_ in liblapack.a(dsteqr.o)
 :info:build      (maybe you meant: _ATL_dswap_xp0yp0aXbX)
 :info:build   "_dgemm_", referenced from:
 :info:build       _dgesvd_ in liblapack.a(dgesvd.o)
 :info:build       _dgebrd_ in liblapack.a(dgebrd.o)
 :info:build   "__gfortran_concat_string", referenced from:
 :info:build       _dgesvd_ in liblapack.a(dgesvd.o)
 :info:build       _dormbr_ in liblapack.a(dormbr.o)
 :info:build       _dormqr_ in liblapack.a(dormqr.o)
 :info:build       _dormlq_ in liblapack.a(dormlq.o)
 }}}

 So this is a duplicate of #34990.

-- 
Ticket URL: <https://trac.macports.org/ticket/35238#comment:1>
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