[MacPorts] #35323: py26-mapnik: undefined symbols boost::system::generic_category boost::system::system_category (was: py26-mapnik fails to install)
MacPorts
noreply at macports.org
Thu Jul 26 05:18:36 PDT 2012
#35323: py26-mapnik: undefined symbols boost::system::generic_category
boost::system::system_category
---------------------------------+------------------------------------------
Reporter: aacinelli@… | Owner: dbsgeo@…
Type: defect | Status: new
Priority: Normal | Milestone:
Component: ports | Version: 2.1.1
Keywords: | Port: py26-mapnik
---------------------------------+------------------------------------------
Changes (by ryandesign@…):
* owner: macports-tickets@… => dbsgeo@…
Old description:
> When I tried to install the py26-mapnik port from the terminal it failed.
> I already had installed some of the ports that py26-mapnik uses:
>
> babbos-mac:~ babbo$ port installed
>
> The following ports are currently installed:
>
> boost @1.50.0_0+no_single+no_static+python26 (active)
> bzip2 @1.0.6_0 (active)
> db46 @4.6.21_6 (active)
> expat @2.1.0_0 (active)
> fftw-3 @3.3.2_0 (active)
> freetype @2.4.10_0 (active)
> gdal @1.9.0_3+expat (active)
> geos @3.3.2_0 (active)
> gettext @0.18.1.1_2 (active)
> giflib @4.2.0_2+x11 (active)
> icu @4.8.1_0 (active)
> jpeg @8d_0 (active)
> libedit @20120601-3.0_0 (active)
> libgeotiff @1.4.0_0 (active)
> libiconv @1.14_0 (active)
> libpng @1.4.12_0 (active)
> libxml2 @2.7.8_0 (active)
> ncurses @5.9_1 (active)
> nosetests_select @0.1_0 (active)
> openssl @1.0.1c_0 (active)
> proj @4.8.0_0 (active)
> py27-distribute @0.6.28_0 (active)
> py27-gdal @1.8.1_0 (active)
> py27-nose @1.1.2_2 (active)
> py27-numpy @1.6.2_0 (active)
> py27-pyproj @1.9.0_0 (active)
> py27-shapely @1.2.15_0 (active)
> python26 @2.6.8_0 (active)
> python27 @2.7.3_0 (active)
> python_select @0.3_1 (active)
> sqlite3 @3.7.13_0 (active)
> tiff @3.9.5_0 (active)
> xorg-kbproto @1.0.6_0 (active)
> xorg-libice @1.0.8_0 (active)
> xorg-libpthread-stubs @0.3_0 (active)
> xorg-libsm @1.2.1_0 (active)
> xorg-libX11 @1.5.0_0 (active)
> xorg-libXau @1.0.7_0 (active)
> xorg-libxcb @1.8.1_2+python27 (active)
> xorg-libXdmcp @1.1.1_0 (active)
> xorg-xcb-proto @1.7.1_0+python27 (active)
> xorg-xproto @7.0.23_0 (active)
> zlib @1.2.7_0 (active)
>
> Then I just entered the following commands:
>
> sudo port select --set python python26
>
> sudo port -d install py26-mapnik
>
> I am using:
>
> Mac OS X 10.7.4
>
> Xcode Version 4.3.3
>
> X11 XQuartz 2.6.4 (xorg-server 1.10.6)
>
> MacPorts 2.1.2
>
> Please see file attached for debug info.
New description:
When I tried to install the py26-mapnik port from the terminal it failed.
I already had installed some of the ports that py26-mapnik uses:
{{{
babbos-mac:~ babbo$ port installed
The following ports are currently installed:
boost @1.50.0_0+no_single+no_static+python26 (active)
bzip2 @1.0.6_0 (active)
db46 @4.6.21_6 (active)
expat @2.1.0_0 (active)
fftw-3 @3.3.2_0 (active)
freetype @2.4.10_0 (active)
gdal @1.9.0_3+expat (active)
geos @3.3.2_0 (active)
gettext @0.18.1.1_2 (active)
giflib @4.2.0_2+x11 (active)
icu @4.8.1_0 (active)
jpeg @8d_0 (active)
libedit @20120601-3.0_0 (active)
libgeotiff @1.4.0_0 (active)
libiconv @1.14_0 (active)
libpng @1.4.12_0 (active)
libxml2 @2.7.8_0 (active)
ncurses @5.9_1 (active)
nosetests_select @0.1_0 (active)
openssl @1.0.1c_0 (active)
proj @4.8.0_0 (active)
py27-distribute @0.6.28_0 (active)
py27-gdal @1.8.1_0 (active)
py27-nose @1.1.2_2 (active)
py27-numpy @1.6.2_0 (active)
py27-pyproj @1.9.0_0 (active)
py27-shapely @1.2.15_0 (active)
python26 @2.6.8_0 (active)
python27 @2.7.3_0 (active)
python_select @0.3_1 (active)
sqlite3 @3.7.13_0 (active)
tiff @3.9.5_0 (active)
xorg-kbproto @1.0.6_0 (active)
xorg-libice @1.0.8_0 (active)
xorg-libpthread-stubs @0.3_0 (active)
xorg-libsm @1.2.1_0 (active)
xorg-libX11 @1.5.0_0 (active)
xorg-libXau @1.0.7_0 (active)
xorg-libxcb @1.8.1_2+python27 (active)
xorg-libXdmcp @1.1.1_0 (active)
xorg-xcb-proto @1.7.1_0+python27 (active)
xorg-xproto @7.0.23_0 (active)
zlib @1.2.7_0 (active)
}}}
Then I just entered the following commands:
{{{
sudo port select --set python python26
sudo port -d install py26-mapnik
}}}
I am using:
Mac OS X 10.7.4
Xcode Version 4.3.3
X11 XQuartz 2.6.4 (xorg-server 1.10.6)
MacPorts 2.1.2
Please see file attached for debug info.
--
Comment:
The log shows missing symbols:
{{{
Undefined symbols for architecture x86_64:
"boost::system::generic_category()", referenced from:
global constructors keyed to _ZN12_GLOBAL__N_12_1Ein
mapnik_datasource.os
global constructors keyed to _ZN12_GLOBAL__N_12_1Ein
mapnik_datasource_cache.os
global constructors keyed to _ZN12_GLOBAL__N_12_1Ein
mapnik_feature.os
global constructors keyed to _ZN12_GLOBAL__N_12_1Ein
mapnik_featureset.os
global constructors keyed to _ZN12_GLOBAL__N_12_1Ein
mapnik_filter.os
global constructors keyed to _ZN12_GLOBAL__N_12_1Ein
mapnik_font_engine.os
global constructors keyed to _ZN12_GLOBAL__N_12_1Ein
mapnik_geometry.os
...
"boost::system::system_category()", referenced from:
global constructors keyed to _ZN12_GLOBAL__N_12_1Ein
mapnik_datasource.os
global constructors keyed to _ZN12_GLOBAL__N_12_1Ein
mapnik_datasource_cache.os
boost::mutex::mutex()in mapnik_datasource_cache.os
boost::mutex::lock() in mapnik_datasource_cache.os
boost::unique_lock<boost::mutex>::lock() in
mapnik_datasource_cache.os
global constructors keyed to _ZN12_GLOBAL__N_12_1Ein
mapnik_feature.os
global constructors keyed to _ZN12_GLOBAL__N_12_1Ein
mapnik_featureset.os
...
ld: symbol(s) not found for architecture x86_64
}}}
This could be an incompatibility with boost 1.50, to which the boost port
was recently updated; we've seen such incompatibilities in other ports and
it's not uncommon for new boost versions to break other ports. You could
try [wiki:howto/InstallingOlderPort downgrading to boost 1.49].
However, before you do so, note that the log also says:
{{{
DEBUG: Skipping completed org.macports.archivefetch (py26-mapnik)
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: Skipping completed org.macports.fetch (py26-mapnik)
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: Skipping completed org.macports.checksum (py26-mapnik)
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: Skipping completed org.macports.extract (py26-mapnik)
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: Skipping completed org.macports.patch (py26-mapnik)
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: Skipping completed org.macports.configure (py26-mapnik)
DEBUG: Privilege de-escalation not attempted as not running as root.
}}}
The "Skipping completed" lines show that you had not cleaned before trying
this build, so its results cannot be trusted. Please "sudo port clean
py26-mapnik" and then try again. If it still fails with undefined symbols,
then proceed as above.
--
Ticket URL: <https://trac.macports.org/ticket/35323#comment:1>
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