[MacPorts] #35400: Pymol crash in Mountain Lion

MacPorts noreply at macports.org
Mon Jul 30 11:19:08 PDT 2012


#35400: Pymol crash in Mountain Lion
-------------------------------------+--------------------------------------
 Reporter:  akouts_1871@…            |       Owner:  howarth@…               
     Type:  defect                   |      Status:  new                     
 Priority:  Normal                   |   Milestone:                          
Component:  ports                    |     Version:  2.1.2                   
 Keywords:  mountainlion             |        Port:  pymol                   
-------------------------------------+--------------------------------------

Comment(by michelle.lynn.gill@…):

 Replying to [comment:10 howarth@…]:
 > I can't reproduce the crash on Mountain Lion with local builds of all of
 the packages against Xcode 4.4.[[BR]]
 > Are you seeing this with the stock tcl build or the threads variant? I
 know on fink, we found that the problems[[BR]]
 > with forked threads under corefoundation would be sporadic and pop up
 irregularly whenever we tried to use that[[BR]]
 > feature. FYI, I am testing on a dual quad Xeon.

 The tcl build I'm using does not have threads enabled:
 {{{
 The following ports are currently installed:
   tcl @8.5.11_0
   tcl @8.5.11_1 (active)
 }}}
 Revision 1 is the local copy I made to remove the core foundation flag.

 Other info: my MacPorts installation is in a custom location, so all my
 ports are built from source. I'm using OS X 10.8 with Xcode 4.4 on a 2008
 MacPro with dual quad-core Xeons (sounds similar to your system). My OS X
 10.8 install was to a freshly formatted drive, so at least in my case,
 there is no chance that the issue is being caused (or prevented from
 happening) by old libraries.

 I should also mention that I built everything in my MacPorts install with
 gcc45 (from macports) selected. And I have your PyMol Portfile setup to
 build against python27, with that being the only change to the PyMol port.
 I'll start building python26 and other deps so I can install the default
 PyMol just to make sure python version isn't the issue.

-- 
Ticket URL: <https://trac.macports.org/ticket/35400#comment:12>
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