[MacPorts] #34685: py27-tables @2.3.1 - build failure

[MacPorts]

#34685: py27-tables @2.3.1 - build failure
---------------------------------------+------------------------------------
 Reporter:  freezingmariner@…          |       Owner:  macports-tickets@…                   
     Type:  defect                     |      Status:  new                                  
 Priority:  Normal                     |   Milestone:                                       
Component:  ports                      |     Version:  2.1.1                                
 Keywords:                             |        Port:  py27-tables                          
---------------------------------------+------------------------------------
 py27-tables is not building on my 10.7.4 system with
 hdf5-18+gcc46+openmpi.

 Here is the error log:
 {{{
 :info:build * Found numpy 1.6.2 package installed.
 :info:build * Found numexpr 1.4.2 package installed.
 :info:build * Found Cython 0.16 package installed.
 :info:build * Found HDF5 headers at ``/opt/local/include``, library at
 ``/opt/local/lib``.
 :info:build .. WARNING:: Could not find the HDF5 runtime.
 :info:build    The HDF5 shared library was *not* found in the default
 library
 :info:build    paths. In case of runtime problems, please remember to
 install it.
 :info:build * Found LZO 2 headers at ``/opt/local/include``, library at
 ``/opt/local/lib``.
 :info:build .. WARNING:: Could not find the LZO 2 runtime.
 :info:build    The LZO 2 shared library was *not* found in the default
 library
 :info:build    paths. In case of runtime problems, please remember to
 install it.
 :info:build * Skipping detection of LZO 1 since LZO 2 has already been
 found.
 :info:build * Found bzip2 headers at ``/opt/local/include``, library at
 ``/opt/local/lib``.
 :info:build cythoning tables/linkExtension.pyx to tables/linkExtension.c
 :info:build running build_ext
 :info:build building 'tables.utilsExtension' extension
 :info:build C compiler: /usr/bin/clang -DNDEBUG -g -fwrapv -O3 -Wall
 -Wstrict-prototypes -arch x86_64
 :info:build
 :info:build compile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1
 -DHAVE_BZ2_LIB=1 -Iblosc
 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/include -I/opt/local/include -I/usr/include
 -I/usr/local/include
 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7
 -c'
 :info:build extra options: '-arch x86_64 -Isrc -DH5_USE_16_API'
 :info:build clang: blosc/blosc.c
 :info:build clang: tables/utilsExtension.c
 :info:build In file included from tables/utilsExtension.c:239:
 :info:build In file included from /opt/local/include/hdf5.h:24:
 :info:build /opt/local/include/H5public.h:61:13: fatal error: 'mpi.h' file
 not found
 :info:build #   include <mpi.h>
 :info:build             ^
 :info:build 1 error generated.
 :info:build In file included from tables/utilsExtension.c:239:
 :info:build In file included from /opt/local/include/hdf5.h:24:
 :info:build /opt/local/include/H5public.h:61:13: fatal error: 'mpi.h' file
 not found
 :info:build #   include <mpi.h>
 :info:build             ^
 :info:build 1 error generated.
 :info:build error: Command "/usr/bin/clang -DNDEBUG -g -fwrapv -O3 -Wall
 -Wstrict-prototypes -arch x86_64 -DNDEBUG=1 -DHAVE_LZO2_LIB=1
 -DHAVE_BZ2_LIB=1 -Iblosc
 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/include -I/opt/local/include -I/usr/include
 -I/usr/local/include
 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7
 -c tables/utilsExtension.c -o
 build/temp.macosx-10.7-x86_64-2.7/tables/utilsExtension.o -arch x86_64
 -Isrc -DH5_USE_16_API" failed with exit status 1
 :info:build Command failed:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports
 .org_release_tarballs_ports_python_py-
 tables/py27-tables/work/tables-2.3.1" &&
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7
 setup.py --no-user-cfg build_ext --inplace --hdf5=/opt/local
 --bzip2=/opt/local --lzo=/opt/local
 :info:build Exit code: 1
 :error:build org.macports.build for port py27-tables returned: command
 execution failed
 :debug:build Error code: CHILDSTATUS 3604 1
 :debug:build Backtrace: command execution failed
     while executing
 "system -nice 0 $fullcmdstring"
     ("eval" body line 1)
     invoked from within
 "eval system $notty $nice \$fullcmdstring"
     invoked from within
 "command_exec build"
     (procedure "portbuild::build_main" line 8)
     invoked from within
 "$procedure $targetname"
 :info:build Warning: targets not executed for py27-tables:
 org.macports.activate org.macports.build org.macports.destroot
 org.macports.install
 :notice:build Please see the log file for port py27-tables for details:
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports
 .org_release_tarballs_ports_python_py-tables/py27-tables/main.log
 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/34685>
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