[MacPorts] #41397: py27-numpy @1.8.0_0: Causes "Symbol not found: _ATL_ccopy" build failures in other ports
MacPorts
noreply at macports.org
Sat Nov 16 13:02:39 PST 2013
#41397: py27-numpy @1.8.0_0: Causes "Symbol not found: _ATL_ccopy" build failures
in other ports
-----------------------------+--------------------------------
Reporter: md14-macports@… | Owner: macports-tickets@…
Type: defect | Status: new
Priority: Normal | Milestone:
Component: ports | Version: 2.2.1
Keywords: | Port: py-numpy
-----------------------------+--------------------------------
After I upgraded to py27-numpy @1.8.0_0, multiple ports that use numpy
fail to build with the same error. For example:
{{{
$ port -d installed py27-numpy
The following ports are currently installed:
py27-numpy @1.8.0_0 (active) platform='darwin 10' archs='x86_64'
$ sudo port -vs install py27-numexpr
...
---> Building py27-numexpr
Traceback (most recent call last):
File "setup.py", line 16, in <module>
import numpy
File
"/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/numpy/__init__.py", line 153, in <module>
from . import add_newdocs
File
"/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/numpy/add_newdocs.py", line 13, in <module>
from numpy.lib import add_newdoc
File
"/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/numpy/lib/__init__.py", line 18, in <module>
from .polynomial import *
File
"/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/numpy/lib/polynomial.py", line 19, in <module>
from numpy.linalg import eigvals, lstsq, inv
File
"/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/numpy/linalg/__init__.py", line 50, in <module>
from .linalg import *
File
"/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/numpy/linalg/linalg.py", line 29, in <module>
from numpy.linalg import lapack_lite, _umath_linalg
ImportError:
dlopen(/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/numpy/linalg/_umath_linalg.so, 2): Symbol not found:
_ATL_ccopy
Referenced from:
/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/numpy/linalg/_umath_linalg.so
Expected in: flat namespace
in
/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/numpy/linalg/_umath_linalg.so
Command failed: cd
"/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports
.org_release_tarballs_ports_python_py-
numexpr/py27-numexpr/work/numexpr-2.2.2" &&
/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7
setup.py --no-user-cfg build
Exit code: 1
Error: org.macports.build for port py27-numexpr returned: command
execution failed
Warning: targets not executed for py27-numexpr: org.macports.activate
org.macports.build org.macports.destroot org.macports.install
Please see the log file for port py27-numexpr for details:
/opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports
.org_release_tarballs_ports_python_py-numexpr/py27-numexpr/main.log
To report a bug, follow the instructions in the guide:
http://guide.macports.org/#project.tickets
Error: Processing of port py27-numexpr failed
}}}
As well as py27-numexpr, I noticed the same build failure for
py27-bottleneck, py27-gnuplot, py27-scipy, py27-svipc, and py27-tables.
--
Ticket URL: <https://trac.macports.org/ticket/41397>
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