[MacPorts] #40689: R @3.0.2_0 +accelerate +cairo +gfortran48 +recommended +x11 Compile error

MacPorts noreply at macports.org
Mon Oct 7 01:23:50 PDT 2013


#40689: R @3.0.2_0 +accelerate +cairo +gfortran48 +recommended +x11 Compile error
-----------------------------+--------------------------------
 Reporter:  grischa.toedt@…  |      Owner:  macports-tickets@…
     Type:  defect           |     Status:  new
 Priority:  Normal           |  Milestone:
Component:  ports            |    Version:  2.2.0
 Keywords:                   |       Port:
-----------------------------+--------------------------------
 Hi,

 on my system i have:

 {{{
 sh-3.2# port select --list gcc
 Available versions for gcc:
         llvm-gcc42
         mp-gcc47
         mp-gcc48 (active)
         none
 }}}

 after "port selfupdate", "port upgrade outdated", "port clean R" i try a
 "port install R +accelerate +cairo +gfortran48 +recommended +x11" and i
 get:

 {{{
 ...
 :info:build f951: internal compiler error: Illegal instruction: 4
 :info:build
 :info:build f951: internal compiler error: Abort trap: 6
 :info:build /opt/local/bin/gfortran-mp-4.8   -fPIC  -pipe -Os -m64  -c
 dposl.f -o dposl.o
 :info:build /opt/local/bin/gfortran-mp-4.8   -fPIC  -pipe -Os -m64  -c
 dqrdc.f -o dqrdc.o
 :info:build f951: internal compiler error: Illegal instruction: 4
 :info:build
 :info:build f951: internal compiler error: Abort trap: 6
 :info:build gfortran-mp-4.8: internal compiler error: Abort trap: 6
 (program f951)
 :info:build gfortran-mp-4.8: internal compiler error: Abort trap: 6
 (program f951)
 :info:build make[3]: *** [dpofa.o] Abort trap: 6
 :info:build make[3]: *** Deleting file `dpofa.o'
 :info:build make[3]: *** Waiting for unfinished jobs....
 :info:build make[3]: *** [dqrdc.o] Abort trap: 6
 :info:build make[3]: *** Deleting file `dqrdc.o'
 :info:build make[3]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.2/src/appl'
 :info:build make[2]: *** [R] Error 2
 :info:build make[2]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.2/src/appl'
 :info:build make[1]: *** [R] Error 1
 :info:build make[1]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.2/src'
 :info:build make: *** [R] Error 1
 :info:build make: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.2'
 :info:build Command failed:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.2"
 && /usr/bin/make -j2 -w all
 :info:build Exit code: 2
 :error:build org.macports.build for port R returned: command execution
 failed
 :debug:build Error code: CHILDSTATUS 76211 2
 :debug:build Backtrace: command execution failed
 }}}

 the full log is attached...

 Any suggestions?

-- 
Ticket URL: <https://trac.macports.org/ticket/40689>
MacPorts <http://www.macports.org/>
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