[MacPorts] #42454: Fatal error dolfin import

[MacPorts]

#42454: Fatal error dolfin import
------------------------+----------------------
  Reporter:  mwathen@…  |      Owner:  sean@…
      Type:  defect     |     Status:  assigned
  Priority:  Normal     |  Milestone:
 Component:  ports      |    Version:  2.2.1
Resolution:             |   Keywords:
      Port:             |
------------------------+----------------------

Comment (by mwathen@…):

 Replying to [comment:11 sean@…]:
 > This is turning out to be difficult to pin down :-( Let's check all your
 shared libraries in MacPorts:
 >
 > {{{
 > $ otool -L /opt/local/lib/*.dylib | grep -i pyt
 > }}}
 >
 > and in python 2.7
 >
 > {{{
 > $ otool -L
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/* | grep
 -i pyt
 > $ find /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib
 -name \*.so -or -name \*.dylib | xargs otool -L | grep -i system/
 > }}}
 >
 > I'm hoping something there will tell us that a package is linking to the
 system python.


 {{{
 $ otool -L /opt/local/lib/*.dylib | grep -i pyt
 }}}

 gives:

 /opt/local/lib/libboost_mpi_python-mt.dylib:
         /opt/local/lib/libboost_mpi_python-mt.dylib (compatibility version
 0.0.0, current version 0.0.0)
         /opt/local/lib/libboost_python-mt.dylib (compatibility version
 0.0.0, current version 0.0.0)
         /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 /opt/local/lib/libboost_python-mt.dylib:
         /opt/local/lib/libboost_python-mt.dylib (compatibility version
 0.0.0, current version 0.0.0)
         /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)
 /opt/local/lib/libpython2.7.dylib:
         /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)

 {{{
 $ otool -L
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/* | grep
 -i pyt
 $ find /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib
 -name \*.so -or -name \*.dylib | xargs otool -L | grep -i system/
 }}}

 gives:

 otool: can't map file:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/pkgconfig
 (Invalid argument)
 otool: can't map file:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 (Invalid argument)
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/libpython2.7.dylib:
         /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python
 (compatibility version 2.7.0, current version 2.7.0)

 and

 otool: one of -fahlLtdoOrTMRIHGScis must be specified
 Usage: otool [-arch arch_type] [-fahlLDtdorSTMRIHGvVcXmqQ] [-mcpu=arg]
 <object file> ...
         -f print the fat headers
         -a print the archive header
         -h print the mach header
         -l print the load commands
         -L print shared libraries used
         -D print shared library id name
         -t print the text section (disassemble with -v)
         -p <routine name>  start dissassemble from routine name
         -s <segname> <sectname> print contents of section
         -d print the data section
         -o print the Objective-C segment
         -r print the relocation entries
         -S print the table of contents of a library
         -T print the table of contents of a dynamic shared library
         -M print the module table of a dynamic shared library
         -R print the reference table of a dynamic shared library
         -I print the indirect symbol table
         -H print the two-level hints table
         -G print the data in code table
         -v print verbosely (symbolically) when possible
         -V print disassembled operands symbolically
         -c print argument strings of a core file
         -X print no leading addresses or headers
         -m don't use archive(member) syntax
         -B force Thumb disassembly (ARM objects only)
         -q use llvm's disassembler (the default)
         -Q use otool(1)'s disassembler
         -mcpu=arg use `arg' as the cpu for disassembly

-- 
Ticket URL: <https://trac.macports.org/ticket/42454#comment:12>
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