[MacPorts] #44084: R fails to upgrade with fortran compiler error

[MacPorts]

#44084: R fails to upgrade with fortran compiler error
-------------------------+--------------------------------
 Reporter:  r1pp3r@…     |      Owner:  macports-tickets@…
     Type:  defect       |     Status:  new
 Priority:  Normal       |  Milestone:
Component:  ports        |    Version:  2.3.0
 Keywords:  R, gfortran  |       Port:  R
-------------------------+--------------------------------
 Trying to upgrade the R port fails, due to a Fortran configure error:

 {{{
 checking whether byte ordering is bigendian... no
 checking for an ANSI C-conforming const... yes
 checking for /usr/bin/clang option to accept ISO C99... none needed
 checking for /usr/bin/clang option to accept ISO Standard C... (cached)
 none needed
 checking for inline... inline
 checking size of int... 4
 checking size of long... 8
 checking size of long long... 8
 checking size of double... 8
 checking size of size_t... 8
 checking size of long double... 16
 checking whether we can compute C Make dependencies... yes, using $(CC)
 -MM
 checking whether /usr/bin/clang supports -c -o FILE.lo... yes
 checking how to get verbose linking output from /opt/local/bin/gfortran-
 mp-4.8... configure: WARNING: compilation failed

 checking for Fortran 77 libraries of /opt/local/bin/gfortran-mp-4.8...
 checking how to get verbose linking output from /usr/bin/clang...
 configure: WARNING: cannot determine how to obtain linking information
 from /usr/bin/clang

 checking for C libraries of /usr/bin/clang...
 checking for dummy main to link with Fortran 77 libraries... none
 checking for Fortran 77 name-mangling scheme... configure: error: in
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_R/R/work/R-3.1.0':
 configure: error: cannot compile a simple Fortran program
 See `config.log' for more details
 Command failed:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_R/R/work/R-3.1.0"
 && ./configure --prefix=/opt/local/Library/Frameworks --enable-R-framework
 --enable-R-shlib --enable-BLAS-shlib --disable-openmp --with-readline
 --with-aqua --without-tcltk --with-libpng --with-ICU --with-included-
 gettext --without-internal-tzcode --with-blas="-framework vecLib" --with-
 lapack="-framework vecLib" --with-x --with-jpeglib
 --x-include=/opt/local/include/X11 --x-lib=/opt/local/lib --with-cairo
 --with-recommended-packages
 Exit code: 1
 Error: Failed to configure R, consult
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_R/R/work/R-3.1.0/config.log
 Error: org.macports.configure for port R returned: configure failure:
 command execution failed
 Warning: targets not executed for R: org.macports.install
 org.macports.configure org.macports.build org.macports.destroot
 Please see the log file for port R for details:
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_R/R/main.log
 Error: Unable to upgrade port: 1
 To report a bug, follow the instructions in the guide:
     http://guide.macports.org/#project.tickets
 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/44084>
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