[MacPorts] #45530: Pymol @1.7.1.1on Yosemite

[MacPorts]

#45530: Pymol @1.7.1.1on Yosemite
-----------------------------+-----------------------
  Reporter:  sean.connell@…  |      Owner:  howarth@…
      Type:  defect          |     Status:  new
  Priority:  Normal          |  Milestone:
 Component:  ports           |    Version:  2.3.2
Resolution:                  |   Keywords:
      Port:  pymol           |
-----------------------------+-----------------------
Changes (by ryandesign@…):

 * owner:  macports-tickets@… => howarth@…
 * cc: sean.connell@… (removed)
 * port:  pymol @1.7.1.1 => pymol


Old description:

> Hello I am have problems running pymol @1.7.1.1 under Mac OS X 10.10.  I
> was first using a version that worked under OS X 10.9 but after the
> upgrade it failed with this error:
>
>  Detected OpenGL version 2.0 or greater. Shaders available.
>  Detected GLSL version 1.20.
>  OpenGL graphics engine:
>   GL_VENDOR:   NVIDIA Corporation
>   GL_RENDERER: NVIDIA GeForce GT 750M OpenGL Engine
>   GL_VERSION:  2.1 NVIDIA-10.0.43 310.41.05f01
> Mac OS X 10.10000 or later required !
> Abort trap: 6
>
> Then following the instructions on mac port I tried to remove and
> reinstall pymol with:
>
> sudo port uninstall pymol
> sudo port install pymol
>
> and now the installation files with:
>
> Error: org.macports.destroot for port pymol returned: error copying
> "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports"
> to
> "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/bin/pymol":
> file already exists

New description:

 Hello I am have problems running pymol @1.7.1.1 under Mac OS X 10.10.  I
 was first using a version that worked under OS X 10.9 but after the
 upgrade it failed with this error:

 {{{
  Detected OpenGL version 2.0 or greater. Shaders available.
  Detected GLSL version 1.20.
  OpenGL graphics engine:
   GL_VENDOR:   NVIDIA Corporation
   GL_RENDERER: NVIDIA GeForce GT 750M OpenGL Engine
   GL_VERSION:  2.1 NVIDIA-10.0.43 310.41.05f01
 Mac OS X 10.10000 or later required !
 Abort trap: 6
 }}}

 Then following the instructions on mac port I tried to remove and
 reinstall pymol with:

 {{{
 sudo port uninstall pymol
 sudo port install pymol
 }}}

 and now the installation files with:

 {{{
 Error: org.macports.destroot for port pymol returned: error copying
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports"
 to
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/bin/pymol":
 file already exists
 }}}

--

Comment:

 The reason why you get an error copying is presumably that you did not
 [http://guide.macports.org/chunked/project.html#project.tickets run "sudo
 port clean pymol" before trying to install it].

-- 
Ticket URL: <https://trac.macports.org/ticket/45530#comment:5>
MacPorts <https://www.macports.org/>
Ports system for OS X