[MacPorts] #46786: R changes broke rNMR package

MacPorts noreply at macports.org
Wed Feb 11 05:28:14 PST 2015


#46786: R changes broke rNMR package
------------------------------------+---------------------------
  Reporter:  howarth.at.macports@…  |      Owner:  kjell.konis@…
      Type:  defect                 |     Status:  new
  Priority:  Normal                 |  Milestone:
 Component:  ports                  |    Version:  2.3.3
Resolution:                         |   Keywords:
      Port:  R                      |
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Comment (by howarth.at.macports@…):

 The attached patch solves the startup problem with rNMR. There still is a
 later problem when testing the program on the test data set related to
 recent tcl/tk changes.

 http://rnmr.nmrfam.wisc.edu/pages/data/files/rNMR_HSQC_Example.zip

 If you follow the instructions on
 http://rnmr.nmrfam.wisc.edu/pages/data/data.html

 cd rNMR_HSQC_Example
 rRNMR
 <select open menu item in Menus window  from rNMR>
 <select rNMR_HSQC_Example directory in Open dialog from rNMR>
 <shift click to select all of the *.hsqc files in the Open dialog from
 rNMR>
 <click the Open button in the Open dialog from rNMR>

 This produces an error message...

 Error in structure(.External(.C_dotTclObjv, objv), class = "tclObj") :
   [tcl] invalid command name "tablelist::tablelist".

 which wasn't present since the recent R/tcl/tk revisions in MacPorts.
 Currently I have...

 tk @8.6.3_0+x11 (active)
 tcl @8.6.3_0+threads

 which always worked in the past.

-- 
Ticket URL: <https://trac.macports.org/ticket/46786#comment:5>
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