[MacPorts] #47696: petsc @3.5.3_1+complex: configure fails (was: PETSc port doesn't compile with +complex)
MacPorts
noreply at macports.org
Sun May 10 09:08:17 PDT 2015
#47696: petsc @3.5.3_1+complex: configure fails
--------------------------------+--------------------
Reporter: drososkourounis@… | Owner: sean@…
Type: defect | Status: new
Priority: Normal | Milestone:
Component: ports | Version: 2.3.3
Resolution: | Keywords:
Port: petsc |
--------------------------------+--------------------
Changes (by larryv@…):
* keywords: PETSc+complex =>
* owner: macports-tickets@… => sean@…
* port: => petsc
Old description:
> Dear developers,
> I tried to compile slepc-3.5.3 with FEAST support. Unfortunately it
> reports that FEAST is supported only with complex numbers.
> {{{
> :~/Work/Software/Optimization/FENICS/slepc-3.5.3$ ./configure
> --prefix=~/Work/Software/Optimization/FENICS/slepc-3.5.3/build --with-
> feast --with-feast-
> dir=~/Work/Software/Optimization/FENICS/FEAST/2.1/lib/osx --with-feast-
> flags='-lfeast_sparse -lfeast'
> Checking environment...
> Checking PETSc installation...
> ERROR: FEAST is supported only with complex numbers.
> ERROR: See "arch-darwin-c-opt/conf/configure.log" file for details
> }}}
>
> This happens because of the following:
>
> {{{
> $cat config/feast.py
> }}}
>
> {{{
> ..........................................................................
> def Check(conf,vars,cmake,tmpdir,directory,libs):
>
> if petscconf.SCALAR != 'complex':
> log.Exit('ERROR: FEAST is supported only with complex numbers.')
>
> }}}
>
> which means that PETSc needs to be compiled with +complex. I tried to
> compile PETSc this way and unfortunately no options succeeded.
>
> {{{
> sudo port install
> petsc at 3.5.3_1+accelerate+hypre+openmpi+parmetis+suitesparse+complex
> -mpich
> sudo port clean blabla
> sudo port uninstall blabla
> sudo port install
> petsc at 3.5.3_1+accelerate+hypre+openmpi+parmetis+suitesparse+complex
> sudo port install
> petsc at 3.5.3_1+accelerate+hypre+parmetis+suitesparse+complex
> }}}
>
> {{{
>
> ~/Work/Software/Optimization/FENICS/slepc-3.5.3$ sudo port install
> petsc at 3.5.3_1+accelerate+hypre+openmpi+parmetis+suitesparse+complex
> -mpich
> Password:
> ---> Computing dependencies for petsc
> ---> Fetching archive for petsc
> ---> Attempting to fetch
> petsc-3.5.3_1+accelerate+complex+hypre+openmpi+parmetis+suitesparse.darwin_13.x86_64.tbz2
> from http://nue.de.packages.macports.org/macports/packages/petsc
> ---> Attempting to fetch
> petsc-3.5.3_1+accelerate+complex+hypre+openmpi+parmetis+suitesparse.darwin_13.x86_64.tbz2
> from
> http://mse.uk.packages.macports.org/sites/packages.macports.org/petsc
> ---> Attempting to fetch
> petsc-3.5.3_1+accelerate+complex+hypre+openmpi+parmetis+suitesparse.darwin_13.x86_64.tbz2
> from http://lil.fr.packages.macports.org/petsc
> ---> Fetching distfiles for petsc
> ---> Verifying checksums for petsc
> ---> Extracting petsc
> ---> Applying patches to petsc
> ---> Configuring petsc
> Error: org.macports.configure for port petsc returned: configure failure:
> command execution failed
> Please see the log file for port petsc for details:
> /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_petsc/petsc/main.log
> To report a bug, follow the instructions in the guide:
> http://guide.macports.org/#project.tickets
> Error: Processing of port petsc failed
>
> But anyone of the above without the +complex works. Below I attach the
> error log
> }}}
New description:
Dear developers,\\
I tried to compile slepc-3.5.3 with FEAST support. Unfortunately it
reports that FEAST is supported only with complex numbers.
{{{
:~/Work/Software/Optimization/FENICS/slepc-3.5.3$ ./configure
--prefix=~/Work/Software/Optimization/FENICS/slepc-3.5.3/build --with-
feast --with-feast-
dir=~/Work/Software/Optimization/FENICS/FEAST/2.1/lib/osx --with-feast-
flags='-lfeast_sparse -lfeast'
Checking environment...
Checking PETSc installation...
ERROR: FEAST is supported only with complex numbers.
ERROR: See "arch-darwin-c-opt/conf/configure.log" file for details
}}}
This happens because of the following:
{{{
$cat config/feast.py
}}}
{{{
..........................................................................
def Check(conf,vars,cmake,tmpdir,directory,libs):
if petscconf.SCALAR != 'complex':
log.Exit('ERROR: FEAST is supported only with complex numbers.')
}}}
which means that PETSc needs to be compiled with +complex. I tried to
compile PETSc this way and unfortunately no options succeeded.
{{{
sudo port install
petsc at 3.5.3_1+accelerate+hypre+openmpi+parmetis+suitesparse+complex -mpich
sudo port clean blabla
sudo port uninstall blabla
sudo port install
petsc at 3.5.3_1+accelerate+hypre+openmpi+parmetis+suitesparse+complex
sudo port install
petsc at 3.5.3_1+accelerate+hypre+parmetis+suitesparse+complex
}}}
{{{
~/Work/Software/Optimization/FENICS/slepc-3.5.3$ sudo port install
petsc at 3.5.3_1+accelerate+hypre+openmpi+parmetis+suitesparse+complex -mpich
Password:
---> Computing dependencies for petsc
---> Fetching archive for petsc
---> Attempting to fetch
petsc-3.5.3_1+accelerate+complex+hypre+openmpi+parmetis+suitesparse.darwin_13.x86_64.tbz2
from http://nue.de.packages.macports.org/macports/packages/petsc
---> Attempting to fetch
petsc-3.5.3_1+accelerate+complex+hypre+openmpi+parmetis+suitesparse.darwin_13.x86_64.tbz2
from http://mse.uk.packages.macports.org/sites/packages.macports.org/petsc
---> Attempting to fetch
petsc-3.5.3_1+accelerate+complex+hypre+openmpi+parmetis+suitesparse.darwin_13.x86_64.tbz2
from http://lil.fr.packages.macports.org/petsc
---> Fetching distfiles for petsc
---> Verifying checksums for petsc
---> Extracting petsc
---> Applying patches to petsc
---> Configuring petsc
Error: org.macports.configure for port petsc returned: configure failure:
command execution failed
Please see the log file for port petsc for details:
/opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_petsc/petsc/main.log
To report a bug, follow the instructions in the guide:
http://guide.macports.org/#project.tickets
Error: Processing of port petsc failed
}}}
But anyone of the above without the +complex works. Below I attach the
error log
--
Comment:
Thanks for the report. In future tickets, please Cc any port maintainers
(`port info --maintainers petsc`).
--
Ticket URL: <https://trac.macports.org/ticket/47696#comment:1>
MacPorts <https://www.macports.org/>
Ports system for OS X
More information about the macports-tickets
mailing list