[MacPorts] #49449: pymol: error: no type named 'shared_ptr' in namespace 'std'

[MacPorts]

#49449: pymol: error: no type named 'shared_ptr' in namespace 'std'
-----------------------------+-----------------------------------
  Reporter:  kathryn.cole@…  |      Owner:  howarth.at.macports@…
      Type:  defect          |     Status:  new
  Priority:  Normal          |  Milestone:
 Component:  ports           |    Version:  2.3.4
Resolution:                  |   Keywords:
      Port:  pymol           |
-----------------------------+-----------------------------------

Comment (by howarth.at.macports@…):

 The proposed fix ix incomplete as the build on 10.7 with Xcode 4.6's clang
 still fails with...


 {{{
 :info:destroot layer2/AtomInfo.cpp:1166:12: error: no member named
 'copy_n' in namespace 'std'; did you mean 'copy'?
 :info:destroot       std::copy_n(u, 6, I->get_anisou());
 :info:destroot       ~~~~~^~~~~~
 :info:destroot            copy
 :info:destroot /usr/include/c++/4.2.1/bits/stl_algobase.h:389:5: note:
 'copy' declared here
 :info:destroot     copy(_InputIterator __first, _InputIterator __last,
 :info:destroot     ^
 :info:destroot layer2/AtomInfo.cpp:1166:7: error: no matching function for
 call to 'copy'
 :info:destroot       std::copy_n(u, 6, I->get_anisou());
 :info:destroot       ^~~~~~~~~~~
 :info:destroot /usr/include/c++/4.2.1/bits/stl_algobase.h:389:5: note:
 candidate template ignored: deduced conflicting types for parameter
 '_InputIterator' ('float
  *' vs. 'int')
 :info:destroot     copy(_InputIterator __first, _InputIterator __last,
 :info:destroot     ^
 :info:destroot layer2/AtomInfo.cpp:1199:10: error: no member named
 'copy_n' in namespace 'std'layer1/CGO.cpp:; did you mean8535: 'copy'?
 :info:destroot     std::copy_n(src->anisou, 6, dst->get_anisou());
 :info:destroot     ~~~~~^~~~~~
 :info:destroot          copy
 :info:destroot /usr/include/c++/4.2.1/bits/stl_algobase.h:389:5: note:
 'copy' declared here
 :info:destroot     copy(_InputIterator __first, _InputIterator __last,
 :info:destroot 5: warning: expression result unused    ^
 :info:destroot layer2/AtomInfo.cpp:1199:5: error: no matching function for
 call to 'copy'
 :info:destroot     std::copy_n(src->anisou, 6, dst->get_anisou());
 :info:destroot     ^~~~~~~~~~~
 :info:destroot /usr/include/c++/4.2.1/bits/stl_algobase.h:389:5: note:
 candidate template ignored: deduced conflicting types for parameter
 '_InputIterator' ('float
  *' vs. 'int')
 :info:destroot     copy(_InputIterator __first, _InputIterator __last,
 :info:destroot     ^
 :info:destroot  [-Wunused-value]
 :info:destroot     CGO_read_int(pc);
 :info:destroot     ^~~~~~~~~~~~~~~~
 :info:destroot layer1/CGO.h:34:26: note: expanded from macro
 'CGO_read_int'
 :info:destroot #define CGO_read_int(p) (*((int*)((p)++)))
 :info:destroot                          ^~~~~~~~~~~~~~~~
 :info:destroot 4 errors generated.
 }}}

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Ticket URL: <https://trac.macports.org/ticket/49449#comment:5>
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