[MacPorts] #51277: hdf5-18 +cxx+hl+openmpi+szip does not compile
MacPorts
noreply at macports.org
Fri Apr 29 17:08:24 PDT 2016
#51277: hdf5-18 +cxx+hl+openmpi+szip does not compile
-----------------------+--------------------------------
Reporter: smasson@… | Owner: macports-tickets@…
Type: defect | Status: new
Priority: Normal | Milestone:
Component: ports | Version: 2.3.4
Keywords: | Port: hdf5-18
-----------------------+--------------------------------
hdf5-18 is not compiling because of the option +openmpi. [[BR]]
In this case, it looks that configure is not able to find the compiler
that is wrapped into openmpi. [[BR]]
There is my main.log file:
{{{
version:1
:msg:clean ---> Computing dependencies for netcdf:info:clean
.:debug:clean netcdf has no conflicts
:debug:clean Searching for dependency: cmake
:debug:clean Found Dependency: receipt exists for cmake
:debug:clean Searching for dependency: gcc48
:debug:clean Found Dependency: receipt exists for gcc48
:debug:clean Searching for dependency: libgcc
:debug:clean Found Dependency: receipt exists for libgcc
:debug:clean Searching for dependency: openmpi-gcc48
:debug:clean Found Dependency: receipt exists for openmpi-gcc48
:debug:clean Searching for dependency: hdf5-18
:debug:clean Found Dependency: receipt exists for hdf5-18
:debug:clean Searching for dependency: curl
:debug:clean Found Dependency: receipt exists for curl
:msg:clean
:debug:main Executing org.macports.main (netcdf)
:debug:main changing euid/egid - current euid: 0 - current egid: 0
:debug:main egid changed to: 501
:debug:main euid changed to: 503
:debug:main Skipping completed org.macports.archivefetch (netcdf)
:debug:main Privilege de-escalation not attempted as not running as root.
:debug:fetch fetch phase started at Fri Apr 29 16:01:34 PDT 2016
:notice:fetch ---> Fetching distfiles for netcdf
:debug:fetch Executing proc-pre-org.macports.fetch-fetch-0
:debug:fetch compilers.enforce_c list:
:debug:fetch compilers.enforce_fortran list:
:debug:fetch compilers.enforce_some_fortran list:
:debug:fetch Executing proc-pre-org.macports.fetch-fetch-1
:debug:fetch openmpi-gcc48 is installed with the following variants:
+fortran
:debug:fetch required: fortran, forbidden:
:debug:fetch accepted
:debug:fetch Executing proc-pre-org.macports.fetch-fetch-2
:debug:fetch mpi.enforce_variant list: hdf5-18
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: , forbidden:
:debug:fetch accepted
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: mpich, forbidden:
:debug:fetch rejected, because required variant mpich is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: mpich_devel, forbidden:
:debug:fetch rejected, because required variant mpich_devel is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: openmpi, forbidden:
:debug:fetch accepted
:debug:fetch compilers.enforce_c list: hdf5-18
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: , forbidden:
:debug:fetch accepted
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: clang33, forbidden:
:debug:fetch rejected, because required variant clang33 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: clang34, forbidden:
:debug:fetch rejected, because required variant clang34 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: clang35, forbidden:
:debug:fetch rejected, because required variant clang35 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: clang36, forbidden:
:debug:fetch rejected, because required variant clang36 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: clang37, forbidden:
:debug:fetch rejected, because required variant clang37 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: clang38, forbidden:
:debug:fetch rejected, because required variant clang38 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: dragonegg33, forbidden:
:debug:fetch rejected, because required variant dragonegg33 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: dragonegg34, forbidden:
:debug:fetch rejected, because required variant dragonegg34 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: gcc44, forbidden:
:debug:fetch rejected, because required variant gcc44 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: gcc45, forbidden:
:debug:fetch rejected, because required variant gcc45 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: gcc46, forbidden:
:debug:fetch rejected, because required variant gcc46 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: gcc47, forbidden:
:debug:fetch rejected, because required variant gcc47 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: gcc48, forbidden:
:debug:fetch rejected, because required variant gcc48 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: gcc49, forbidden:
:debug:fetch rejected, because required variant gcc49 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: gcc5, forbidden:
:debug:fetch rejected, because required variant gcc5 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: gcc6, forbidden:
:debug:fetch rejected, because required variant gcc6 is missing
:debug:fetch hdf5-18 is installed with the following variants:
+cxx+hl+openmpi+szip
:debug:fetch required: llvm, forbidden:
:debug:fetch rejected, because required variant llvm is missing
:error:fetch Install hdf5-18 +gcc48
:error:fetch org.macports.fetch for port netcdf returned: hdf5-18 +gcc48
not installed
:debug:fetch Error code: NONE
:debug:fetch Backtrace: hdf5-18 +gcc48 not installed
while executing
"proc-pre-org.macports.fetch-fetch-2 org.macports.fetch"
("eval" body line 1)
invoked from within
"eval $pre $targetname"
:info:fetch Warning: targets not executed for netcdf: org.macports.install
org.macports.fetch org.macports.checksum org.macports.extract
org.macports.patch org.macports.configure org.macports.build
org.macports.destroot
:notice:fetch Please see the log file for port netcdf for details:
/opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_netcdf/netcdf/main.log
}}}
--
Ticket URL: <https://trac.macports.org/ticket/51277>
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