[MacPorts] #52030: py27-scipy-0.18.0_0+gfortran+openblas.darwin_15.x86_64.tbz2 fails to build

[MacPorts]

#52030: py27-scipy-0.18.0_0+gfortran+openblas.darwin_15.x86_64.tbz2 fails to build
-------------------------+--------------------
  Reporter:  paulomal@…  |      Owner:  sean@…
      Type:  defect      |     Status:  new
  Priority:  Normal      |  Milestone:
 Component:  ports       |    Version:  2.3.4
Resolution:              |   Keywords:
      Port:  py-scipy    |
-------------------------+--------------------
Description changed by mf2k@…:

Old description:

> I'm trying to compile scipy linking it to openblas but it fails to build.
> I'm running OS X 10.11.6 (El Capitan). This seems to be related to a
> fixed ticket for numpy+openblas (Ticket #51250
> [https://trac.macports.org/ticket/51250]) which also failed to build for
> the same reason: :info:build ld: unknown option: "-rpath=/opt/local/lib".
>
> Here's the end of the log where the error is reported:
>

> {{{
> :info:build /opt/local/bin/gfortran-mp-5 -Wall -g -Wall -g -undefined
> dynamic_lookup -bundle
> build/temp.macosx-10.11-x86_64-2.7/scipy/integrate/_quadpackmodule.o
> -L/opt/local/lib -L/opt/local/lib/gcc5/gcc/x86_64-apple-darwin15/5.4.0
> -Lbuild/temp.macosx-10.11-x86_64-2.7 -Wl,-rpath="/opt/local/lib"
> -lquadpack -lmach -lopenblas -lopenblas -lgfortran -o
> build/lib.macosx-10.11-x86_64-2.7/scipy/integrate/_quadpack.so
> :info:build ld: unknown option: -rpath=/opt/local/lib
> :info:build collect2: error: ld returned 1 exit status
> :info:build ld: unknown option: -rpath=/opt/local/lib
> :info:build collect2: error: ld returned 1 exit status
> :info:build error: Command "/opt/local/bin/gfortran-mp-5 -Wall -g -Wall
> -g -undefined dynamic_lookup -bundle
> build/temp.macosx-10.11-x86_64-2.7/scipy/integrate/_quadpackmodule.o
> -L/opt/local/lib -L/opt/local/lib/gcc5/gcc/x86_64-apple-darwin15/5.4.0
> -Lbuild/temp.macosx-10.11-x86_64-2.7 -Wl,-rpath="/opt/local/lib"
> -lquadpack -lmach -lopenblas -lopenblas -lgfortran -o
> build/lib.macosx-10.11-x86_64-2.7/scipy/integrate/_quadpack.so" failed
> with exit status 1
> :info:build Command failed:  cd
> "/opt/local/var/macports/build/_opt_local_var_macports_sources_sea.us.rsync.macports
> .org_release_tarballs_ports_python_py-scipy/py27-scipy/work/scipy-0.18.0"
> &&
> /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7
> setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec
> /opt/local/bin/gfortran-mp-5 --f77flags=' -Os -fno-second-underscore'
> --f90exec /opt/local/bin/gfortran-mp-5 --f90flags=' -Os -fno-second-
> underscore' config --cc /usr/bin/clang --include-dirs /opt/local/include
> --library-dirs /opt/local/lib build
> :info:build Exit code: 1
> :error:build org.macports.build for port py27-scipy returned: command
> execution failed
> :debug:build Error code: CHILDSTATUS 98773 1
> :debug:build Backtrace: command execution failed
>     while executing
> "system -nice 0 $fullcmdstring"
>     ("eval" body line 1)
>     invoked from within
> "eval system $notty $nice \$fullcmdstring"
>     invoked from within
> "command_exec build"
>     (procedure "portbuild::build_main" line 8)
>     invoked from within
> "portbuild::build_main org.macports.build"
>     ("eval" body line 1)
>     invoked from within
> "eval $procedure $targetname"
> :info:build Warning: targets not executed for py27-scipy:
> org.macports.activate org.macports.build org.macports.destroot
> org.macports.install
> }}}

New description:

 I'm trying to compile scipy linking it to openblas but it fails to build.
 I'm running OS X 10.11.6 (El Capitan). This seems to be related to a fixed
 ticket for numpy+openblas (ticket:51250]) which also failed to build for
 the same reason: :info:build ld: unknown option: "-rpath=/opt/local/lib".

 Here's the end of the log where the error is reported:


 {{{
 :info:build /opt/local/bin/gfortran-mp-5 -Wall -g -Wall -g -undefined
 dynamic_lookup -bundle
 build/temp.macosx-10.11-x86_64-2.7/scipy/integrate/_quadpackmodule.o
 -L/opt/local/lib -L/opt/local/lib/gcc5/gcc/x86_64-apple-darwin15/5.4.0
 -Lbuild/temp.macosx-10.11-x86_64-2.7 -Wl,-rpath="/opt/local/lib"
 -lquadpack -lmach -lopenblas -lopenblas -lgfortran -o
 build/lib.macosx-10.11-x86_64-2.7/scipy/integrate/_quadpack.so
 :info:build ld: unknown option: -rpath=/opt/local/lib
 :info:build collect2: error: ld returned 1 exit status
 :info:build ld: unknown option: -rpath=/opt/local/lib
 :info:build collect2: error: ld returned 1 exit status
 :info:build error: Command "/opt/local/bin/gfortran-mp-5 -Wall -g -Wall -g
 -undefined dynamic_lookup -bundle
 build/temp.macosx-10.11-x86_64-2.7/scipy/integrate/_quadpackmodule.o
 -L/opt/local/lib -L/opt/local/lib/gcc5/gcc/x86_64-apple-darwin15/5.4.0
 -Lbuild/temp.macosx-10.11-x86_64-2.7 -Wl,-rpath="/opt/local/lib"
 -lquadpack -lmach -lopenblas -lopenblas -lgfortran -o
 build/lib.macosx-10.11-x86_64-2.7/scipy/integrate/_quadpack.so" failed
 with exit status 1
 :info:build Command failed:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_sea.us.rsync.macports
 .org_release_tarballs_ports_python_py-scipy/py27-scipy/work/scipy-0.18.0"
 &&
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7
 setup.py --no-user-cfg config_fc --fcompiler gnu95 --f77exec
 /opt/local/bin/gfortran-mp-5 --f77flags=' -Os -fno-second-underscore'
 --f90exec /opt/local/bin/gfortran-mp-5 --f90flags=' -Os -fno-second-
 underscore' config --cc /usr/bin/clang --include-dirs /opt/local/include
 --library-dirs /opt/local/lib build
 :info:build Exit code: 1
 :error:build org.macports.build for port py27-scipy returned: command
 execution failed
 :debug:build Error code: CHILDSTATUS 98773 1
 :debug:build Backtrace: command execution failed
     while executing
 "system -nice 0 $fullcmdstring"
     ("eval" body line 1)
     invoked from within
 "eval system $notty $nice \$fullcmdstring"
     invoked from within
 "command_exec build"
     (procedure "portbuild::build_main" line 8)
     invoked from within
 "portbuild::build_main org.macports.build"
     ("eval" body line 1)
     invoked from within
 "eval $procedure $targetname"
 :info:build Warning: targets not executed for py27-scipy:
 org.macports.activate org.macports.build org.macports.destroot
 org.macports.install
 }}}

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Ticket URL: <https://trac.macports.org/ticket/52030#comment:2>
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