[MacPorts] #50273: atlas build fails (was: octave atlas build fails)

MacPorts noreply at macports.org
Sat Jan 9 21:45:16 PST 2016


#50273: atlas build fails
-------------------------+---------------------
  Reporter:  cjohnson@…  |      Owner:  vince@…
      Type:  defect      |     Status:  new
  Priority:  Normal      |  Milestone:
 Component:  ports       |    Version:  2.3.4
Resolution:              |   Keywords:
      Port:  atlas       |
-------------------------+---------------------
Changes (by ryandesign@…):

 * owner:  macports-tickets@… => vince@…
 * port:  octave => atlas


Old description:

> xcode version 7C68 -- OS X (10.11.2)
> New machine (new MAC user) -- have done
>
>   sudo port selfupdate
>   sudo port upgrade outdated
>
> Everything worked until the installation of atlas
>
> Can not get past this error with the build of atlas
>
> Here is the log file:
> /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/main.log
> {{{
> version:1
> :debug:main changing euid/egid - current euid: 0 - current egid: 0
> :debug:main egid changed to: 501
> :debug:main euid changed to: 503
> :debug:main Executing org.macports.main (atlas)
> :debug:main Privilege de-escalation not attempted as not running as root.
> :debug:main Skipping completed org.macports.archivefetch (atlas)
> :debug:main Privilege de-escalation not attempted as not running as root.
> :debug:main Skipping completed org.macports.fetch (atlas)
> :debug:main Privilege de-escalation not attempted as not running as root.
> :debug:main Skipping completed org.macports.checksum (atlas)
> :debug:main Privilege de-escalation not attempted as not running as root.
> :debug:main Skipping completed org.macports.extract (atlas)
> :debug:main Privilege de-escalation not attempted as not running as root.
> :debug:main Skipping completed org.macports.patch (atlas)
> :debug:main Privilege de-escalation not attempted as not running as root.
> :debug:main Skipping completed org.macports.configure (atlas)
> :debug:main Privilege de-escalation not attempted as not running as root.
> :debug:build build phase started at Sat Jan  9 12:07:59 PST 2016
> :notice:build --->  Building atlas
> :debug:build Executing org.macports.build (atlas)
> :debug:build port disallows a parallel build
> :debug:build Environment:
> CC='/usr/bin/clang'
> CC_PRINT_OPTIONS='YES'
> CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/.CC_PRINT_OPTIONS'
> CPATH='/opt/local/include'
> CXX='/usr/bin/clang++'
> LIBRARY_PATH='/opt/local/lib'
> MACOSX_DEPLOYMENT_TARGET='10.11'
> :debug:build Assembled command: 'cd
> "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build"
> && /usr/bin/make -w build'
> :debug:build Executing command line:  cd
> "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build"
> && /usr/bin/make -w build
> :info:build make: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
> :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make -f
> Make.top build
> :info:build make[1]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
> :info:build cd bin/ ;
> /Applications/Xcode.app/Contents/Developer/usr/bin/make xatlas_build
> :info:build make[2]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
> :info:build make[2]: `xatlas_build' is up to date.
> :info:build make[2]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
> :info:build cd bin/ ; ./xatlas_build -1 0 -a 1 -l 1
> :info:build make[2]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
> :info:build make[2]: `IArchDef.grd' is up to date.
> :info:build make[2]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
> :info:build make[2]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
> :info:build cd
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/auxil
> ; /Applications/Xcode.app/Contents/Developer/usr/bin/make -s
> ATL_buildinfo.o
> :info:build cd
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/auxil
> ; /Applications/Xcode.app/Contents/Developer/usr/bin/make lib
> :info:build make[3]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/auxil'
> :info:build cd
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1
> ; /Applications/Xcode.app/Contents/Developer/usr/bin/make lib
> :info:build make[4]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make dgen
> :info:build make[5]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make
> Make_drot
> :info:build make[6]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build make[6]: `Make_drot' is up to date.
> :info:build make[6]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make -f
> Make_drot lib
> :info:build make[6]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build make[6]: Nothing to be done for `lib'.
> :info:build make[6]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make
> Make_daxpby
> :info:build make[6]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build make[6]: `Make_daxpby' is up to date.
> :info:build make[6]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make -f
> Make_daxpby lib
> :info:build make[6]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build make[6]: Nothing to be done for `lib'.
> :info:build make[6]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make
> Make_dcpsc
> :info:build make[6]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build cd
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1
> ; /Applications/Xcode.app/Contents/Developer/usr/bin/make dinstall_cpsc
> :info:build make[7]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
> :info:build rm -f GEN/*
> :info:build ./xcpscsrch -p d
> :info:build TST: make dcpsctest urout=cpsc1_x0y0.c opt=" -X 4 1 -1 2 -3
> -Y 4 1 -1 3 -2"
> :info:build make[8]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
> :info:build rm -f dcpsc.c dcpsc.o xdcpsctst
> :info:build cp
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//tune/blas/level1/CPSC/cpsc1_x0y0.c
> dcpsc.c
> :info:build /usr/bin/clang -DL2SIZE=4194304
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/include
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include/contrib
> -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX -DATL_ARCH_Corei3
> -DATL_CPUMHZ=3100 -DATL_AVXMAC -DATL_SSE3 -DATL_SSE2 -DATL_SSE1
> -DATL_USE64BITS -DATL_GAS_x8664 -DATL_DYLIBS -DPentiumCPS=3100
> -DATL_FULL_LAPACK -DATL_NCPU=4 -O3 -fomit-frame-pointer -fPIC
> -march=native -mfma  -DDREAL -c dcpsc.c
> :info:build /usr/bin/clang -DL2SIZE=4194304
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/include
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include/contrib
> -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX -DATL_ARCH_Corei3
> -DATL_CPUMHZ=3100 -DATL_AVXMAC -DATL_SSE3 -DATL_SSE2 -DATL_SSE1
> -DATL_USE64BITS -DATL_GAS_x8664 -DATL_DYLIBS -DPentiumCPS=3100
> -DATL_FULL_LAPACK -DATL_NCPU=4 -O3 -fomit-frame-pointer -fPIC
> -march=native -mfma  -o xdcpsctst dcpsctest.o \
> :info:build           ATL_dcpsc_stub.o dcpsc.o
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/lib/libtstatlas.a
> -lpthread -lm
> :info:build
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin/ATLrun.sh
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1
> xdcpsctst -n 777 -X 4 1 -1 2 -3 -Y 4 1 -1 3 -2
> :info:build   ITST         N     alpha  incX  incY    TEST
> :info:build ======  ========  ========  ====  ====  ======
> :info:build      0       777      1.00     1     1  PASSED
> :info:build      1       777     -1.00     1     1  PASSED
> :info:build      2       777      0.90     1     1  PASSED
> :info:build      3       777      1.00     1    -1  PASSED
> :info:build      4       777     -1.00     1    -1  PASSED
> :info:build      5       777      0.90     1    -1  PASSED
> :info:build      6       777      1.00     1     3  PASSED
> :info:build      7       777     -1.00     1     3  PASSED
> :info:build      8       777      0.90     1     3  PASSED
> :info:build      9       777      1.00     1    -2  PASSED
> :info:build     10       777     -1.00     1    -2  PASSED
> :info:build     11       777      0.90     1    -2  PASSED
> :info:build     12       777      1.00    -1     1  PASSED
> :info:build     13       777     -1.00    -1     1  PASSED
> :info:build     14       777      0.90    -1     1  PASSED
> :info:build     15       777      1.00    -1    -1  PASSED
> :info:build     16       777     -1.00    -1    -1  PASSED
> :info:build     17       777      0.90    -1    -1  PASSED
> :info:build     18       777      1.00    -1     3  PASSED
> :info:build     19       777     -1.00    -1     3  PASSED
> :info:build     20       777      0.90    -1     3  PASSED
> :info:build     21       777      1.00    -1    -2  PASSED
> :info:build     22       777     -1.00    -1    -2  PASSED
> :info:build     23       777      0.90    -1    -2  PASSED
> :info:build     24       777      1.00     2     1  PASSED
> :info:build     25       777     -1.00     2     1  PASSED
> :info:build     26       777      0.90     2     1  PASSED
> :info:build     27       777      1.00     2    -1  PASSED
> :info:build     28       777     -1.00     2    -1  PASSED
> :info:build     29       777      0.90     2    -1  PASSED
> :info:build     30       777      1.00     2     3  PASSED
> :info:build     31       777     -1.00     2     3  PASSED
> :info:build     32       777      0.90     2     3  PASSED
> :info:build     33       777      1.00     2    -2  PASSED
> :info:build     34       777     -1.00     2    -2  PASSED
> :info:build     35       777      0.90     2    -2  PASSED
> :info:build     36       777      1.00    -3     1  PASSED
> :info:build     37       777     -1.00    -3     1  PASSED
> :info:build     38       777      0.90    -3     1  PASSED
> :info:build     39       777      1.00    -3    -1  PASSED
> :info:build     40       777     -1.00    -3    -1  PASSED
> :info:build     41       777      0.90    -3    -1  PASSED
> :info:build     42       777      1.00    -3     3  PASSED
> :info:build     43       777     -1.00    -3     3  PASSED
> :info:build     44       777      0.90    -3     3  PASSED
> :info:build     45       777      1.00    -3    -2  PASSED
> :info:build     46       777     -1.00    -3    -2  PASSED
> :info:build     47       777      0.90    -3    -2  PASSED
> :info:build ALL CPSC SANITY TESTS PASSED.
> :info:build
> :info:build make[8]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
> :info:build TST: make dcpsctest urout=cpsc1_x1y1.c opt=""
> :info:build make[8]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
> :info:build rm -f dcpsc.c dcpsc.o xdcpsctst
> :info:build cp
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//tune/blas/level1/CPSC/cpsc1_x1y1.c
> dcpsc.c
> :info:build /usr/bin/clang -DL2SIZE=4194304
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/include
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include/contrib
> -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX -DATL_ARCH_Corei3
> -DATL_CPUMHZ=3100 -DATL_AVXMAC -DATL_SSE3 -DATL_SSE2 -DATL_SSE1
> -DATL_USE64BITS -DATL_GAS_x8664 -DATL_DYLIBS -DPentiumCPS=3100
> -DATL_FULL_LAPACK -DATL_NCPU=4 -O3 -fomit-frame-pointer -fPIC
> -march=native -mfma  -DDREAL -c dcpsc.c
> :info:build /usr/bin/clang -DL2SIZE=4194304
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/include
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include
> -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include/contrib
> -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX -DATL_ARCH_Corei3
> -DATL_CPUMHZ=3100 -DATL_AVXMAC -DATL_SSE3 -DATL_SSE2 -DATL_SSE1
> -DATL_USE64BITS -DATL_GAS_x8664 -DATL_DYLIBS -DPentiumCPS=3100
> -DATL_FULL_LAPACK -DATL_NCPU=4 -O3 -fomit-frame-pointer -fPIC
> -march=native -mfma  -o xdcpsctst dcpsctest.o \
> :info:build           ATL_dcpsc_stub.o dcpsc.o
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/lib/libtstatlas.a
> -lpthread -lm
> :info:build
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin/ATLrun.sh
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1
> xdcpsctst -n 777
> :info:build   ITST         N     alpha  incX  incY    TEST
> :info:build ======  ========  ========  ====  ====  ======
> :info:build      0       777      1.00     1     1  PASSED
> :info:build      1       777     -1.00     1     1  PASSED
> :info:build      2       777      0.90     1     1  PASSED
> :info:build ALL CPSC SANITY TESTS PASSED.
> :info:build
> :info:build make[8]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
> :info:build NO GENERAL CASE SURVIVED!!  ABORTING!!
> :info:build   ID  incX  incY  alpha  beta  ROUT
> :info:build ====  ====  ====  =====  ====  =============
> :info:build    1     0     0     2     2  cpsc1_x0y0.c
> :info:build    2     1     1     2     2  cpsc1_x1y1.c
> :info:build
> :info:build   ID  incX  incY  alpha  beta  ROUT
> :info:build ====  ====  ====  =====  ====  =============
> :info:build    1     0     0     2     2  cpsc1_x0y0.c
> :info:build    2     1     1     2     2  cpsc1_x1y1.c
> :info:build
> :info:build    incX  incY  alpha  beta    ID  ROUTINE
> :info:build    ====  ====  =====  ====  ====  ==================
> :info:build       0     0      2     2    -1  UNKNOWN
> :info:build       1     1      2     2    -1  UNKNOWN
> :info:build
> :info:build make[7]: *** [dinstall_cpsc] Error 255
> :info:build make[7]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
> :info:build make[6]: *** [Make_dcpsc] Error 2
> :info:build make[6]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build make[5]: *** [dgen] Error 2
> :info:build make[5]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build make[4]: *** [dlib] Error 2
> :info:build make[4]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
> :info:build make[3]: *** [lib.grd] Error 2
> :info:build make[3]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/auxil'
> :info:build make[2]: *** [IStage1] Error 2
> :info:build make[2]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
> :info:build ERROR 703 DURING CACHESIZE SEARCH!!.  CHECK
> INSTALL_LOG/Stage1.log FOR DETAILS.
> :info:build make[2]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
> :info:build cd
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build
> ; /Applications/Xcode.app/Contents/Developer/usr/bin/make error_report
> :info:build make[3]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
> :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make -f
> Make.top error_report
> :info:build make[4]: Entering directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
> :info:build uname -a 2>&1 >> bin/INSTALL_LOG/ERROR.LOG
> :info:build /usr/bin/clang -v 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
> :info:build Apple LLVM version 7.0.2 (clang-700.1.81)
> :info:build Target: x86_64-apple-darwin15.2.0
> :info:build Thread model: posix
> :info:build /usr/bin/clang -V 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
> :info:build clang: error: argument to '-V' is missing (expected 1 value)
> :info:build clang: error: no input files
> :info:build make[4]: [error_report] Error 1 (ignored)
> :info:build /usr/bin/clang --version 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
> :info:build tar cf error_Corei364AVXMAC.tar Make.inc bin/INSTALL_LOG/*
> :info:build bzip2 error_Corei364AVXMAC.tar
> :info:build bzip2: Output file error_Corei364AVXMAC.tar.bz2 already
> exists.
> :info:build make[4]: *** [error_report] Error 1
> :info:build make[4]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
> :info:build make[3]: *** [error_report] Error 2
> :info:build make[3]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
> :info:build make[2]: *** [error_report] Error 2
> :info:build make[2]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
> :info:build cat: ../../CONFIG/error.txt: No such file or directory
> :info:build cat: ../../CONFIG/error.txt: No such file or directory
> :info:build
> :info:build
> :info:build BEGIN STAGE 1-0-0: SYSTEM PROBE/AUX COMPILE at 12:07
> :info:build make[1]: *** [build] Error 255
> :info:build make[1]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
> :info:build make: *** [build] Error 2
> :info:build make: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
> :info:build Command failed:  cd
> "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build"
> && /usr/bin/make -w build
> :info:build Exit code: 2
> :error:build org.macports.build for port atlas returned: command
> execution failed
> :debug:build Error code: CHILDSTATUS 92633 2
> :debug:build Backtrace: command execution failed
>     while executing
> "system -nice 0 $fullcmdstring"
>     ("eval" body line 1)
>     invoked from within
> "eval system $notty $nice \$fullcmdstring"
>     invoked from within
> "command_exec build"
>     (procedure "portbuild::build_main" line 8)
>     invoked from within
> "portbuild::build_main org.macports.build"
>     ("eval" body line 1)
>     invoked from within
> "eval $procedure $targetname"
> :info:build Warning: targets not executed for atlas:
> org.macports.activate org.macports.build org.macports.destroot
> org.macports.install
> :error:build Failed to install atlas
> :debug:build Registry error: libnetpbm not registered as installed &
> active.
>     invoked from within
> "registry_active $subport"
>     invoked from within
> "$workername eval registry_active \$subport"
> :notice:build Please see the log file for port atlas for details:
> /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/main.log
> }}}

New description:

 xcode version 7C68 -- OS X (10.11.2) \\
 New machine (new MAC user) -- have done

 {{{
   sudo port selfupdate
   sudo port upgrade outdated
 }}}

 Everything worked until the installation of atlas

 Can not get past this error with the build of atlas

 Here is the log file:
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/main.log
 {{{
 version:1
 :debug:main changing euid/egid - current euid: 0 - current egid: 0
 :debug:main egid changed to: 501
 :debug:main euid changed to: 503
 :debug:main Executing org.macports.main (atlas)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:main Skipping completed org.macports.archivefetch (atlas)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:main Skipping completed org.macports.fetch (atlas)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:main Skipping completed org.macports.checksum (atlas)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:main Skipping completed org.macports.extract (atlas)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:main Skipping completed org.macports.patch (atlas)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:main Skipping completed org.macports.configure (atlas)
 :debug:main Privilege de-escalation not attempted as not running as root.
 :debug:build build phase started at Sat Jan  9 12:07:59 PST 2016
 :notice:build --->  Building atlas
 :debug:build Executing org.macports.build (atlas)
 :debug:build port disallows a parallel build
 :debug:build Environment:
 CC='/usr/bin/clang'
 CC_PRINT_OPTIONS='YES'
 CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/.CC_PRINT_OPTIONS'
 CPATH='/opt/local/include'
 CXX='/usr/bin/clang++'
 LIBRARY_PATH='/opt/local/lib'
 MACOSX_DEPLOYMENT_TARGET='10.11'
 :debug:build Assembled command: 'cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build"
 && /usr/bin/make -w build'
 :debug:build Executing command line:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build"
 && /usr/bin/make -w build
 :info:build make: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
 :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make -f
 Make.top build
 :info:build make[1]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
 :info:build cd bin/ ;
 /Applications/Xcode.app/Contents/Developer/usr/bin/make xatlas_build
 :info:build make[2]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
 :info:build make[2]: `xatlas_build' is up to date.
 :info:build make[2]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
 :info:build cd bin/ ; ./xatlas_build -1 0 -a 1 -l 1
 :info:build make[2]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
 :info:build make[2]: `IArchDef.grd' is up to date.
 :info:build make[2]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
 :info:build make[2]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
 :info:build cd
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/auxil
 ; /Applications/Xcode.app/Contents/Developer/usr/bin/make -s
 ATL_buildinfo.o
 :info:build cd
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/auxil
 ; /Applications/Xcode.app/Contents/Developer/usr/bin/make lib
 :info:build make[3]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/auxil'
 :info:build cd
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1
 ; /Applications/Xcode.app/Contents/Developer/usr/bin/make lib
 :info:build make[4]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make dgen
 :info:build make[5]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make
 Make_drot
 :info:build make[6]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build make[6]: `Make_drot' is up to date.
 :info:build make[6]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make -f
 Make_drot lib
 :info:build make[6]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build make[6]: Nothing to be done for `lib'.
 :info:build make[6]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make
 Make_daxpby
 :info:build make[6]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build make[6]: `Make_daxpby' is up to date.
 :info:build make[6]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make -f
 Make_daxpby lib
 :info:build make[6]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build make[6]: Nothing to be done for `lib'.
 :info:build make[6]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make
 Make_dcpsc
 :info:build make[6]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build cd
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1
 ; /Applications/Xcode.app/Contents/Developer/usr/bin/make dinstall_cpsc
 :info:build make[7]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
 :info:build rm -f GEN/*
 :info:build ./xcpscsrch -p d
 :info:build TST: make dcpsctest urout=cpsc1_x0y0.c opt=" -X 4 1 -1 2 -3 -Y
 4 1 -1 3 -2"
 :info:build make[8]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
 :info:build rm -f dcpsc.c dcpsc.o xdcpsctst
 :info:build cp
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//tune/blas/level1/CPSC/cpsc1_x0y0.c
 dcpsc.c
 :info:build /usr/bin/clang -DL2SIZE=4194304
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/include
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include/contrib
 -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX -DATL_ARCH_Corei3
 -DATL_CPUMHZ=3100 -DATL_AVXMAC -DATL_SSE3 -DATL_SSE2 -DATL_SSE1
 -DATL_USE64BITS -DATL_GAS_x8664 -DATL_DYLIBS -DPentiumCPS=3100
 -DATL_FULL_LAPACK -DATL_NCPU=4 -O3 -fomit-frame-pointer -fPIC
 -march=native -mfma  -DDREAL -c dcpsc.c
 :info:build /usr/bin/clang -DL2SIZE=4194304
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/include
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include/contrib
 -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX -DATL_ARCH_Corei3
 -DATL_CPUMHZ=3100 -DATL_AVXMAC -DATL_SSE3 -DATL_SSE2 -DATL_SSE1
 -DATL_USE64BITS -DATL_GAS_x8664 -DATL_DYLIBS -DPentiumCPS=3100
 -DATL_FULL_LAPACK -DATL_NCPU=4 -O3 -fomit-frame-pointer -fPIC
 -march=native -mfma  -o xdcpsctst dcpsctest.o \
 :info:build           ATL_dcpsc_stub.o dcpsc.o
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/lib/libtstatlas.a
 -lpthread -lm
 :info:build
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin/ATLrun.sh
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1
 xdcpsctst -n 777 -X 4 1 -1 2 -3 -Y 4 1 -1 3 -2
 :info:build   ITST         N     alpha  incX  incY    TEST
 :info:build ======  ========  ========  ====  ====  ======
 :info:build      0       777      1.00     1     1  PASSED
 :info:build      1       777     -1.00     1     1  PASSED
 :info:build      2       777      0.90     1     1  PASSED
 :info:build      3       777      1.00     1    -1  PASSED
 :info:build      4       777     -1.00     1    -1  PASSED
 :info:build      5       777      0.90     1    -1  PASSED
 :info:build      6       777      1.00     1     3  PASSED
 :info:build      7       777     -1.00     1     3  PASSED
 :info:build      8       777      0.90     1     3  PASSED
 :info:build      9       777      1.00     1    -2  PASSED
 :info:build     10       777     -1.00     1    -2  PASSED
 :info:build     11       777      0.90     1    -2  PASSED
 :info:build     12       777      1.00    -1     1  PASSED
 :info:build     13       777     -1.00    -1     1  PASSED
 :info:build     14       777      0.90    -1     1  PASSED
 :info:build     15       777      1.00    -1    -1  PASSED
 :info:build     16       777     -1.00    -1    -1  PASSED
 :info:build     17       777      0.90    -1    -1  PASSED
 :info:build     18       777      1.00    -1     3  PASSED
 :info:build     19       777     -1.00    -1     3  PASSED
 :info:build     20       777      0.90    -1     3  PASSED
 :info:build     21       777      1.00    -1    -2  PASSED
 :info:build     22       777     -1.00    -1    -2  PASSED
 :info:build     23       777      0.90    -1    -2  PASSED
 :info:build     24       777      1.00     2     1  PASSED
 :info:build     25       777     -1.00     2     1  PASSED
 :info:build     26       777      0.90     2     1  PASSED
 :info:build     27       777      1.00     2    -1  PASSED
 :info:build     28       777     -1.00     2    -1  PASSED
 :info:build     29       777      0.90     2    -1  PASSED
 :info:build     30       777      1.00     2     3  PASSED
 :info:build     31       777     -1.00     2     3  PASSED
 :info:build     32       777      0.90     2     3  PASSED
 :info:build     33       777      1.00     2    -2  PASSED
 :info:build     34       777     -1.00     2    -2  PASSED
 :info:build     35       777      0.90     2    -2  PASSED
 :info:build     36       777      1.00    -3     1  PASSED
 :info:build     37       777     -1.00    -3     1  PASSED
 :info:build     38       777      0.90    -3     1  PASSED
 :info:build     39       777      1.00    -3    -1  PASSED
 :info:build     40       777     -1.00    -3    -1  PASSED
 :info:build     41       777      0.90    -3    -1  PASSED
 :info:build     42       777      1.00    -3     3  PASSED
 :info:build     43       777     -1.00    -3     3  PASSED
 :info:build     44       777      0.90    -3     3  PASSED
 :info:build     45       777      1.00    -3    -2  PASSED
 :info:build     46       777     -1.00    -3    -2  PASSED
 :info:build     47       777      0.90    -3    -2  PASSED
 :info:build ALL CPSC SANITY TESTS PASSED.
 :info:build
 :info:build make[8]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
 :info:build TST: make dcpsctest urout=cpsc1_x1y1.c opt=""
 :info:build make[8]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
 :info:build rm -f dcpsc.c dcpsc.o xdcpsctst
 :info:build cp
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//tune/blas/level1/CPSC/cpsc1_x1y1.c
 dcpsc.c
 :info:build /usr/bin/clang -DL2SIZE=4194304
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/include
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include/contrib
 -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX -DATL_ARCH_Corei3
 -DATL_CPUMHZ=3100 -DATL_AVXMAC -DATL_SSE3 -DATL_SSE2 -DATL_SSE1
 -DATL_USE64BITS -DATL_GAS_x8664 -DATL_DYLIBS -DPentiumCPS=3100
 -DATL_FULL_LAPACK -DATL_NCPU=4 -O3 -fomit-frame-pointer -fPIC
 -march=native -mfma  -DDREAL -c dcpsc.c
 :info:build /usr/bin/clang -DL2SIZE=4194304
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/include
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include
 -I/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/..//include/contrib
 -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX -DATL_ARCH_Corei3
 -DATL_CPUMHZ=3100 -DATL_AVXMAC -DATL_SSE3 -DATL_SSE2 -DATL_SSE1
 -DATL_USE64BITS -DATL_GAS_x8664 -DATL_DYLIBS -DPentiumCPS=3100
 -DATL_FULL_LAPACK -DATL_NCPU=4 -O3 -fomit-frame-pointer -fPIC
 -march=native -mfma  -o xdcpsctst dcpsctest.o \
 :info:build           ATL_dcpsc_stub.o dcpsc.o
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/lib/libtstatlas.a
 -lpthread -lm
 :info:build
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin/ATLrun.sh
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1
 xdcpsctst -n 777
 :info:build   ITST         N     alpha  incX  incY    TEST
 :info:build ======  ========  ========  ====  ====  ======
 :info:build      0       777      1.00     1     1  PASSED
 :info:build      1       777     -1.00     1     1  PASSED
 :info:build      2       777      0.90     1     1  PASSED
 :info:build ALL CPSC SANITY TESTS PASSED.
 :info:build
 :info:build make[8]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
 :info:build NO GENERAL CASE SURVIVED!!  ABORTING!!
 :info:build   ID  incX  incY  alpha  beta  ROUT
 :info:build ====  ====  ====  =====  ====  =============
 :info:build    1     0     0     2     2  cpsc1_x0y0.c
 :info:build    2     1     1     2     2  cpsc1_x1y1.c
 :info:build
 :info:build   ID  incX  incY  alpha  beta  ROUT
 :info:build ====  ====  ====  =====  ====  =============
 :info:build    1     0     0     2     2  cpsc1_x0y0.c
 :info:build    2     1     1     2     2  cpsc1_x1y1.c
 :info:build
 :info:build    incX  incY  alpha  beta    ID  ROUTINE
 :info:build    ====  ====  =====  ====  ====  ==================
 :info:build       0     0      2     2    -1  UNKNOWN
 :info:build       1     1      2     2    -1  UNKNOWN
 :info:build
 :info:build make[7]: *** [dinstall_cpsc] Error 255
 :info:build make[7]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/tune/blas/level1'
 :info:build make[6]: *** [Make_dcpsc] Error 2
 :info:build make[6]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build make[5]: *** [dgen] Error 2
 :info:build make[5]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build make[4]: *** [dlib] Error 2
 :info:build make[4]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/blas/level1'
 :info:build make[3]: *** [lib.grd] Error 2
 :info:build make[3]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/src/auxil'
 :info:build make[2]: *** [IStage1] Error 2
 :info:build make[2]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
 :info:build ERROR 703 DURING CACHESIZE SEARCH!!.  CHECK
 INSTALL_LOG/Stage1.log FOR DETAILS.
 :info:build make[2]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
 :info:build cd
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build
 ; /Applications/Xcode.app/Contents/Developer/usr/bin/make error_report
 :info:build make[3]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
 :info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make -f
 Make.top error_report
 :info:build make[4]: Entering directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
 :info:build uname -a 2>&1 >> bin/INSTALL_LOG/ERROR.LOG
 :info:build /usr/bin/clang -v 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
 :info:build Apple LLVM version 7.0.2 (clang-700.1.81)
 :info:build Target: x86_64-apple-darwin15.2.0
 :info:build Thread model: posix
 :info:build /usr/bin/clang -V 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
 :info:build clang: error: argument to '-V' is missing (expected 1 value)
 :info:build clang: error: no input files
 :info:build make[4]: [error_report] Error 1 (ignored)
 :info:build /usr/bin/clang --version 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
 :info:build tar cf error_Corei364AVXMAC.tar Make.inc bin/INSTALL_LOG/*
 :info:build bzip2 error_Corei364AVXMAC.tar
 :info:build bzip2: Output file error_Corei364AVXMAC.tar.bz2 already
 exists.
 :info:build make[4]: *** [error_report] Error 1
 :info:build make[4]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
 :info:build make[3]: *** [error_report] Error 2
 :info:build make[3]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
 :info:build make[2]: *** [error_report] Error 2
 :info:build make[2]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build/bin'
 :info:build cat: ../../CONFIG/error.txt: No such file or directory
 :info:build cat: ../../CONFIG/error.txt: No such file or directory
 :info:build
 :info:build
 :info:build BEGIN STAGE 1-0-0: SYSTEM PROBE/AUX COMPILE at 12:07
 :info:build make[1]: *** [build] Error 255
 :info:build make[1]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
 :info:build make: *** [build] Error 2
 :info:build make: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build'
 :info:build Command failed:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/work/ATLAS/build"
 && /usr/bin/make -w build
 :info:build Exit code: 2
 :error:build org.macports.build for port atlas returned: command execution
 failed
 :debug:build Error code: CHILDSTATUS 92633 2
 :debug:build Backtrace: command execution failed
     while executing
 "system -nice 0 $fullcmdstring"
     ("eval" body line 1)
     invoked from within
 "eval system $notty $nice \$fullcmdstring"
     invoked from within
 "command_exec build"
     (procedure "portbuild::build_main" line 8)
     invoked from within
 "portbuild::build_main org.macports.build"
     ("eval" body line 1)
     invoked from within
 "eval $procedure $targetname"
 :info:build Warning: targets not executed for atlas: org.macports.activate
 org.macports.build org.macports.destroot org.macports.install
 :error:build Failed to install atlas
 :debug:build Registry error: libnetpbm not registered as installed &
 active.
     invoked from within
 "registry_active $subport"
     invoked from within
 "$workername eval registry_active \$subport"
 :notice:build Please see the log file for port atlas for details:
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_atlas/atlas/main.log
 }}}

--

Comment:

 That log file is not from a
 [https://guide.macports.org/chunked/project.html#project.tickets clean
 build attempt]. Please "sudo port clean atlas", try again, and attach (not
 paste) the entire (compressed) log to this ticket.

-- 
Ticket URL: <https://trac.macports.org/ticket/50273#comment:1>
MacPorts <https://www.macports.org/>
Ports system for OS X


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