[MacPorts] #50218: Error: Failed to install doxygen

[MacPorts]

#50218: Error: Failed to install doxygen
-----------------------+--------------------
  Reporter:  justin@…  |      Owner:  css@…
      Type:  defect    |     Status:  closed
  Priority:  Normal    |  Milestone:
 Component:  ports     |    Version:  2.3.4
Resolution:  invalid   |   Keywords:
      Port:  doxygen   |
-----------------------+--------------------

Comment (by oscar@…):

 You're probably right. I'm afraid I'm not comfortable enough around this
 to be of much help.
 I have not tried repairing disk permissions. While figuring out how I
 found the following ([https://support.apple.com/en-us/HT201560 link]),
 don't know if it helps.

      Beginning with OS X El Capitan, system file permissions are
 automatically protected. It's no longer necessary to verify or repair
 permissions with Disk Utility.

 Owner is set to `root` and group to `wheel`. Read access for both
 `pthread.h` and `errno.h`. (`pthread.h` also have write access for owner).
 Output from commands:

 {{{
 MVBook:tmp osed$ sudo -u macports /usr/bin/clang++ -v -I/opt/local/include
 -pipe -Os -stdlib=libc++ -DICONV_COMPILES -arch x86_64 -mmacosx-version-
 min=10.11 -o /dev/null -c /tmp/test.cpp
 Apple LLVM version 7.0.2 (clang-700.1.81)
 Target: x86_64-apple-darwin15.2.0
 Thread model: posix
 "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang"
 -cc1 -triple x86_64-apple-macosx10.11.0 -Wdeprecated-objc-isa-usage
 -Werror=deprecated-objc-isa-usage -emit-obj -disable-free -disable-llvm-
 verifier -main-file-name test.cpp -mrelocation-model pic -pic-level 2
 -mthread-model posix -mdisable-fp-elim -masm-verbose -munwind-tables
 -target-cpu core2 -target-linker-version 253.9 -v -dwarf-column-info
 -coverage-file /dev/null -resource-dir
 /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/7.0.2
 -D ICONV_COMPILES -I /opt/local/include -stdlib=libc++ -Os -fdeprecated-
 macro -fdebug-compilation-dir /private/tmp -ferror-limit 19 -fmessage-
 length 80 -stack-protector 1 -mstackrealign -fblocks -fobjc-
 runtime=macosx-10.11.0 -fencode-extended-block-signature -fcxx-exceptions
 -fexceptions -fmax-type-align=16 -fdiagnostics-show-option -fcolor-
 diagnostics -vectorize-loops -vectorize-slp -o /dev/null -x c++
 /tmp/test.cpp
 clang -cc1 version 7.0.2 based upon LLVM 3.7.0svn default target x86_64
 -apple-darwin15.2.0
 ignoring nonexistent directory "/usr/include/c++/v1"
 #include "..." search starts here:
 #include <...> search starts here:
  /opt/local/include
 /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1
  /usr/local/include
 /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/7.0.2/include
 /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include
  /usr/include
  /System/Library/Frameworks (framework directory)
  /Library/Frameworks (framework directory)
 End of search list.
 }}}
 {{{
 MVBook:tmp osed$ mdfind -name errno.h
 /usr/include/sys/errno.h
 /opt/local/share/doc/boost/libs/exception/doc/errinfo_errno.html
 /System/Library/Frameworks/Kernel.framework/Versions/A/Headers/sys/errno.h
 /usr/include/bsm/audit_errno.h
 /usr/include/errno.h
 /usr/include/apr-1/apr_errno.h
 /usr/include/apr-1/apu_errno.h
 /usr/include/php/ext/iconv/php_iconv_supports_errno.h
 /opt/local/include/boost/exception/errinfo_errno.hpp
 /System/Library/Frameworks/Tcl.framework/Versions/8.5/Resources/Documentation/Reference/Tcl/TclLib/SetErrno.htm
 /usr/local/avr/include/errno.h
 /usr/local/CrossPack-AVR-20131216/avr/include/errno.h
 /usr/local/CrossPack-AVR-20131216/doc/avr-libc/group__avr__errno.html
 /usr/local/CrossPack-AVR-20131216/man/errno.h.3
 /usr/local/octave/3.8.0/include/octave-3.8.0/octave/oct-errno.h
 /usr/local/octave/3.8.0/libexec/llvm-3.3/include/llvm/Support/Errno.h
 /Library/Frameworks/Python.framework/Versions/3.5/Resources/English.lproj/Documentation/library/errno.html
 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/50218#comment:14>
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