[MacPorts] #52427: esmf @6_3_0rp1+gcc6 error: Compile Error

[MacPorts]

#52427: esmf @6_3_0rp1+gcc6  error: Compile Error
--------------------------------+--------------------------------
 Reporter:  William.Capehart@…  |      Owner:  macports-tickets@…
     Type:  defect              |     Status:  new
 Priority:  Normal              |  Milestone:
Component:  ports               |    Version:  2.3.4
 Keywords:                      |       Port:  esmf ncarg
--------------------------------+--------------------------------
 I am getting Errors with macOS Sierra (10.12) with gcc6 that is also
 impacting the install of NCL-NCARG

 Log Attached

 {{{
 work/esmf/src/Infrastructure/Mesh/src/Moab/io/../parallel
 -DESMF_NO_INTEGER_1_BYTE -DESMF_NO_INTEGER_2_BYTE -DESMF_LAPACK=1
 -DESMF_MOAB=1 -DESMF_NETCDF=1 -DESMF_XERCES=1 -DESMF_NO_PTHREADS
 -DESMF_NO_OPENACC -DSx86_64_small=1 -DESMF_OS_Darwin=1
 -D__SDIR__='"src/Infrastructure/Mesh/src/Moab/io"' -DESMF_MPIUNI
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/WriteGmsh.cpp
 -o
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/obj/objO/Darwin.gfortran.64.mpiuni.default/WriteGmsh.o
 :info:build make[10]: ***
 [/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/obj/objO/Darwin.gfortran.64.mpiuni.default/ReadABAQUS.o]
 Error 1
 :info:build make[10]: *** Waiting for unfinished jobs....
 :info:build In file included from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/../AffineXform.hpp:22:0,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/SMF_State.hpp:4,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/SMF_State.cpp:3:
 :info:build
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/../moab/Matrix3.hpp:
 In member function 'bool moab::Matrix3::invert()':
 :info:build
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/../moab/Matrix3.hpp:272:10:
 warning: 'int finite(double)' is deprecated [-Wdeprecated-declarations]
 :info:build      if (!finite(i) || fabs(i) <
 std::numeric_limits<double>::epsilon())
 :info:build           ^~~~~~
 :info:build In file included from /opt/local/include/gcc6/c++/cmath:45:0,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/../moab/CartVect.hpp:19,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/../AffineXform.hpp:21,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/SMF_State.hpp:4,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/SMF_State.cpp:3:
 :info:build /opt/local/lib/gcc6/gcc/x86_64-apple-darwin16/6.1.0/include-
 fixed/math.h:772:12: note: declared here
 :info:build  extern int finite(double)
 __OSX_AVAILABLE_BUT_DEPRECATED(__MAC_10_0, __MAC_10_9, __IPHONE_NA,
 __IPHONE_NA);
 :info:build             ^~~~~~
 :info:build In file included from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/../AffineXform.hpp:22:0,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/SMF_State.hpp:4,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/SMF_State.cpp:3:
 :info:build
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/../moab/Matrix3.hpp:272:18:
 warning: 'int finite(double)' is deprecated [-Wdeprecated-declarations]
 :info:build      if (!finite(i) || fabs(i) <
 std::numeric_limits<double>::epsilon())
 :info:build                   ^
 :info:build In file included from /opt/local/include/gcc6/c++/cmath:45:0,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/../moab/CartVect.hpp:19,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/../AffineXform.hpp:21,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/SMF_State.hpp:4,
 :info:build                  from
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io/SMF_State.cpp:3:
 :info:build /opt/local/lib/gcc6/gcc/x86_64-apple-darwin16/6.1.0/include-
 fixed/math.h:772:12: note: declared here
 :info:build  extern int finite(double)
 __OSX_AVAILABLE_BUT_DEPRECATED(__MAC_10_0, __MAC_10_9, __IPHONE_NA,
 __IPHONE_NA);
 :info:build             ^~~~~~
 :info:build make[10]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/mod/modO/Darwin.gfortran.64.mpiuni.default'
 :info:build make[9]: *** [esmflib] Error 2
 :info:build make[9]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/mod/modO/Darwin.gfortran.64.mpiuni.default'
 :info:build make[8]: *** [tree_lib] Error 2
 :info:build make[8]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab/io'
 :info:build make[7]: *** [tree] Error 1
 :info:build make[7]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src/Moab'
 :info:build make[6]: *** [tree] Error 1
 :info:build make[6]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh/src'
 :info:build make[5]: *** [tree] Error 1
 :info:build make[5]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure/Mesh'
 :info:build make[4]: *** [tree] Error 1
 :info:build make[4]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src/Infrastructure'
 :info:build make[3]: *** [tree] Error 1
 :info:build make[3]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/src'
 :info:build make[2]: *** [tree] Error 1
 :info:build make[2]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf'
 :info:build make[1]: *** [build_libs] Error 2
 :info:build make[1]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf'
 :info:build make: *** [lib] Error 2
 :info:build make: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf'
 :info:build Command failed:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf"
 && /usr/bin/make -j8 -w lib
 ESMF_LIBDIR=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/work/esmf/lib
 :info:build Exit code: 2
 :error:build org.macports.build for port esmf returned: command execution
 failed
 :debug:build Error code: CHILDSTATUS 46219 2
 :debug:build Backtrace: command execution failed
     while executing
 "system -nice 0 $fullcmdstring"
     ("eval" body line 1)
     invoked from within
 "eval system $notty $nice \$fullcmdstring"
     invoked from within
 "command_exec build"
     (procedure "portbuild::build_main" line 8)
     invoked from within
 "portbuild::build_main org.macports.build"
     ("eval" body line 1)
     invoked from within
 "eval $procedure $targetname"
 :info:build Warning: targets not executed for esmf: org.macports.activate
 org.macports.build org.macports.destroot org.macports.install
 :notice:build Please see the log file for port esmf for details:
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_esmf/esmf/main.log

 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/52427>
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