[MacPorts] #54177: netcdf @4.4.1: update to 4.4.1.1

[MacPorts]

#54177: netcdf @4.4.1: update to 4.4.1.1
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  Reporter:  Dave-Allured  |      Owner:  tenomoto
      Type:  update        |     Status:  assigned
  Priority:  Normal        |  Milestone:
 Component:  ports         |    Version:
Resolution:                |   Keywords:
      Port:  netcdf        |
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Comment (by dschlaep):

 I am having the same hdf5 header/library mismatch as described in
 (#52289)[https://trac.macports.org/ticket/52289] when loading netCDF files
 with the R package ncdf4 v1.16:
 > The HDF5 header files used to compile this application do not match
 > the version used by the HDF5 library to which this application is
 linked.


 I cannot wait until the macport netcdf is updated to version 4.4.1.1 and
 this works again.

 I was able to get the header and library version of hdf5 that is used by
 ncdf4 to agree with the following steps:

 1) install macports 'netcdf' (4.4.1_3+dap+netcdf4) 'hdf5-18'
 (1.8.18_0+cxx+hl)

 2) copy (or create softlinks to) the content
     * from /opt/local/lib/hdf5-18/bin to /opt/local/bin
     * from /opt/local/lib/hdf5-18/include to /opt/local/include
     * from /opt/local/lib/hdf5-18/lib to /opt/local/lib
 3) install the R package 'ncdf4' from source

 Now, I can load netCDF files with ncdf4 without segfault.

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Ticket URL: <https://trac.macports.org/ticket/54177#comment:3>
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