[MacPorts] #55150: Pymol gives error on fetching from any https site

[MacPorts]

#55150: Pymol gives error on fetching from any https site
---------------------------+-----------------------------
 Reporter:  carlosfamilia  |      Owner:
     Type:  defect         |     Status:  new
 Priority:  Normal         |  Milestone:  MacPorts Future
Component:  ports          |    Version:  2.4.2
 Keywords:  Pymol          |       Port:  pymol
---------------------------+-----------------------------
 Pymol gives error on fetching from any https site, to reproduce you can
 try "fetch 89594, type=cid" or try to install a plugin from the internet,
 https://raw.githubusercontent.com/ADplugin/ADplugin/master/autodock.py for
 instance.

 It gives the following error for the plugin (for the structure just says
 it cannot load the structure):

 Plugin-Error: <urlopen error [SSL:CERTIFICATE_VERIFY_FAILED] certificate
 verify failed (_ssl.c:661)>

 I have done some searching and apparently python ssl suffered some change
 in somewhere in python 2.7.xx that requires certificates. Not sure if it
 helps.

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Ticket URL: <https://trac.macports.org/ticket/55150>
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