[MacPorts] #55696: Problem with updated QGIS3 port

[MacPorts]

#55696: Problem with updated QGIS3 port
----------------------+-------------------
  Reporter:  Malauch  |      Owner:
      Type:  defect   |     Status:  new
  Priority:  Normal   |  Milestone:
 Component:  ports    |    Version:  2.4.2
Resolution:           |   Keywords:
      Port:  qgis3    |
----------------------+-------------------

Comment (by gnw3):

 I was able to open and close the preferences for a raster layer (taken
 from a NetCDF4 file) several times, but after closing prefs and trying to
 drag the layer in the window qgis3 crashed:
 {{{
 System Integrity Protection: enabled

 Crashed Thread:        16  Thread (pooled)

 Exception Type:        EXC_CRASH (SIGABRT)
 Exception Codes:       0x0000000000000000, 0x0000000000000000
 Exception Note:        EXC_CORPSE_NOTIFY

 Application Specific Information:
 abort() called
 *** error for object 0x7fd152d920c0: pointer being freed was not allocated

 [...]

 Thread 16 Crashed:: Thread (pooled)
 0   libsystem_kernel.dylib              0x00007fff913e3f06 __pthread_kill
 + 10
 1   libsystem_pthread.dylib             0x00007fff8edfa4ec pthread_kill +
 90
 2   libsystem_c.dylib                   0x00007fff8a50d6df abort + 129
 3   libsystem_malloc.dylib              0x00007fff8f427041 free + 425
 4   libhdf5.101.dylib                   0x000000011590ff7c
 H5FL__reg_gc_list + 56
 5   libhdf5.101.dylib                   0x0000000115910266 H5FL_reg_free +
 77
 6   libhdf5.101.dylib                   0x00000001159c1f6d H5S_close + 341
 7   libhdf5.101.dylib                   0x00000001158759ad H5A_free + 246
 8   ???                                 0x06000000000015fb 0 +
 432345564227573243
 9   libgdal.20.dylib                    0x000000010dd8c169
 HDF5CreateGroupObjs(long long, char const*, void*) + 1446
 10  ???                                 0x00007fd15490a040 0 +
 140537043656768

 }}}

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Ticket URL: <https://trac.macports.org/ticket/55696#comment:1>
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