[MacPorts] #57146: h5py Library not updated

MacPorts noreply at macports.org
Fri Sep 21 23:27:28 UTC 2018


#57146: h5py Library not updated
-------------------------+----------------------
  Reporter:  boatmorrow  |      Owner:  eborisch
      Type:  defect      |     Status:  assigned
  Priority:  Normal      |  Milestone:
 Component:  ports       |    Version:  2.5.3
Resolution:              |   Keywords:
      Port:  py-h5py     |
-------------------------+----------------------

Comment (by boatmorrow):

 All ports are upgraded.

 Version is py-h5py @2.8.0_1

 I see no hdf5 in /usr/local, but a version is loaded for another program
 in a home directory.  I don'y think h5py would look there.

 There is a .dylib folder in
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/h5py/

 Could it be from a pip install?  I tried that when this h5py didn't work -
 pip is from macports -  and I have run pip uninstall h5py.

 Tried all the uninstall and reinstall from above.  I am still getting:

 python -c "import h5py"
 Traceback (most recent call last):
   File "<string>", line 1, in <module>
   File
 "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/h5py/__init__.py", line 26, in <module>
     from . import _errors
 ImportError:
 dlopen(/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/h5py/_errors.so, 2): Library not loaded:
 /opt/local/lib/libhdf5.101.dylib
   Referenced from:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/h5py/_errors.so
   Reason: Incompatible library version: _errors.so requires version
 103.0.0 or later, but libhdf5.101.dylib provides version 102.0.0

-- 
Ticket URL: <https://trac.macports.org/ticket/57146#comment:6>
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