[MacPorts] #57146: h5py Library not updated
MacPorts
noreply at macports.org
Sat Sep 22 13:53:19 UTC 2018
#57146: h5py Library not updated
-------------------------+----------------------
Reporter: boatmorrow | Owner: eborisch
Type: defect | Status: assigned
Priority: Normal | Milestone:
Component: ports | Version: 2.5.3
Resolution: | Keywords:
Port: py-h5py |
-------------------------+----------------------
Comment (by boatmorrow):
Hello,
I'm guessing the pip install is the problem. I've tried to remove all
vestige of the pip install, but I can't seem to find all it. I've
uninstalled h5py via pip. I've then uninstalled the py27-h5py. A grep of
h5py on
/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/ returns nothing, so wherever it is it isn't there. I then
to a reinstall with sudo port install -s py27-h5py.
Somewhere its still finding the offending libraries, because I still get:
python -c "import h5py"
Traceback (most recent call last):
File "<string>", line 1, in <module>
File
"/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/h5py/__init__.py", line 26, in <module>
from . import _errors
ImportError:
dlopen(/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/h5py/_errors.so, 2): Library not loaded:
/opt/local/lib/libhdf5.101.dylib
Referenced from:
/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
/site-packages/h5py/_errors.so
Reason: Incompatible library version: _errors.so requires version
103.0.0 or later, but libhdf5.101.dylib provides version 102.0.0
However, I think this isn't a bug in the port but in my system, so I think
its my problem not yours. I think I installed some packages with fairly
heavy dependencies using pip, and now I'm in trouble for using two
different package managers - lesson learned.
Thanks for your time, I appreciate the help.
--
Ticket URL: <https://trac.macports.org/ticket/57146#comment:9>
MacPorts <https://www.macports.org/>
Ports system for macOS
More information about the macports-tickets
mailing list