[MacPorts] #58332: py27-astropy segfaults at 14% in tests

[MacPorts]

#58332: py27-astropy segfaults at 14% in tests
----------------------------------+--------------------------
 Reporter:  Russell-Jones-OxPhys  |      Owner:  (none)
     Type:  defect                |     Status:  new
 Priority:  Normal                |  Milestone:
Component:  ports                 |    Version:  2.5.4
 Keywords:                        |       Port:  py27-astropy
----------------------------------+--------------------------
 This is from a semi-clean install (/opt/local/ removed)
 I can repeat with a full clean if that'd make a difference.

 {{{
 sudo port install -f py27-astropy
 sudo port install py27-pytest
 # installs 4.4.0, <3.7 required
 sudo port uninstall py27-pytest
 sudo port install py27-pip
 python2.7 -m pip install --user pip setuptools wheel
 python2.7 -m pip install --user 'pytest<3.7'
 # installs 3.6.4
 python2.7 -c 'import astropy;astropy.test()'

 platform darwin -- Python 2.7.16, pytest-3.6.4, py-1.8.0, pluggy-0.7.1

 Running tests with Astropy version 2.0.10.
 Running tests in
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/astropy.

 Date: 2019-04-08T13:56:52

 Platform: Darwin-18.5.0-x86_64-i386-64bit

 Executable:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python

 Full Python Version:
 2.7.16 (default, Apr  1 2019, 14:50:41)
 [GCC 4.2.1 Compatible Apple LLVM 10.0.1 (clang-1001.0.46.3)]

 encodings: sys: ascii, locale: UTF-8, filesystem: utf-8, unicode bits: 15
 byteorder: little
 float info: dig: 15, mant_dig: 15

 Numpy: 1.16.2
 Scipy: not available
 Matplotlib: not available
 h5py: not available
 Pandas: not available
 Cython: 0.29.6
 astropy_helpers: 2.0.8
 Using Astropy options: remote_data: none.

 rootdir:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/astropy,
 inifile:
 collected 12695 items / 9 skipped

 [Lots of dots, filenames, etc removed]

 ../../opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/astropy/coordinates/tests/test_sky_coord.py . [ 11%]
 ................................................................................................
 [ 12%]
 ................................................................................................
 [ 13%]
 ................................................................................................
 [ 14%]
 .........................................................................................x.Segmentation
 fault: 11
 }}}

 {{{
 $ port installed
 The following ports are currently installed:
    bzip2 @1.0.6_0 (active)
    cctools @921_1+llvm70 (active)
    cfitsio @3.450_0 (active)
    cython_select @0.1_1 (active)
    db48 @4.8.30_4 (active)
    erfa @1.4.0_0 (active)
    expat @2.2.6_1 (active)
    fftw-3 @3.3.8_0 (active)
    gcc8 @8.3.0_0 (active)
    gcc_select @0.1_8 (active)
    gettext @0.19.8.1_0 (active)
    gmp @6.1.2_1 (active)
    icu @58.2_2 (active)
    isl @0.20_0 (active)
    ld64 @3_1+ld64_xcode (active)
    ld64-xcode @2_1 (active)
    libcxx @5.0.1_4 (active)
    libedit @20181209-3.1_0 (active)
    libffi @3.2.1_0 (active)
    libgcc @1.0_0 (active)
    libgcc8 @8.3.0_0 (active)
    libiconv @1.15_0 (active)
    libmpc @1.1.0_1 (active)
    libxml2 @2.9.9_1 (active)
    llvm-7.0 @7.0.1_1 (active)
    llvm_select @2_0 (active)
    mpfr @4.0.2_0 (active)
    ncurses @6.1_0 (active)
    nosetests_select @0.1_0 (active)
    OpenBLAS @0.3.5_1+gcc8+lapack (active)
    openssl @1.0.2r_0 (active)
    py27-astropy @2.0.10_0 (active)
    py27-cython @0.29.6_0 (active)
    py27-nose @1.3.7_1 (active)
    py27-numpy @1.16.2_1+gfortran+openblas (active)
    py27-setuptools @41.0.0_0 (active)
    python2_select @0.0_3 (active)
    python27 @2.7.16_1 (active)
    python_select @0.3_8 (active)
    sqlite3 @3.27.2_0 (active)
    wcslib @6.2_0 (active)
    xar @1.6.1_0 (active)
    xz @5.2.4_0 (active)
    zlib @1.2.11_0 (active)
 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/58332>
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