[MacPorts] #58008: py36-h5py @2.9.0_0+mpich: h5py is running against HDF5 1.10.4 when it was built against 1.8.4
MacPorts
noreply at macports.org
Sat Feb 2 19:52:40 UTC 2019
#58008: py36-h5py @2.9.0_0+mpich: h5py is running against HDF5 1.10.4 when it was
built against 1.8.4
------------------------+-----------------------
Reporter: BestPotato | Owner: (none)
Type: defect | Status: new
Priority: Normal | Milestone:
Component: ports | Version: 2.5.4
Keywords: | Port: py36-h5py
------------------------+-----------------------
installed HDF5 and then installed py36-h5py, both through macports. When
importing h5py into python3, I get the following warning:
{{{
/Users/<user>/.macports/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6
/site-packages/h5py/__init__.py:75: UserWarning: h5py is running against
HDF5 1.10.4 when it was built against 1.8.4, this may cause problems
'{0}.{1}.{2}'.format(*version.hdf5_built_version_tuple)
}}}
I am running HDF5 @1.10.4_0+hl+mpich, so I don't understand how h5py was
built against a version I don't have installed. It seems h5py works for
the most part. Some of the self tests failed, but the code portions I need
appear to be functioning.
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Ticket URL: <https://trac.macports.org/ticket/58008>
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